Free what are ions software for linux

What is a Perl module to find out about running services.

SYNOPSIS

$what = What->new(
Host => my.domain.org,
Port => 28,
);

$what->mta;
$what->mta_version;
$what->mta_banner;

The What class is interface to classes providing information about running services. What::MTA is the only implementation so far.

What::MTA

MTAs supported are: Exim, Postfix (version only on localhost), Sendmail, Courier (name only), XMail, MasqMail.

See What::MTA for details.

METHODS

new

$obj = What->new( Host => "10.10.10.1", Port => 25 )

mta()

Returns the name of the MTA running.

mta_banner()

Returns the banner message.

mta_version()

Returns the MTA version.

Pathogen Warrior project is a puzzle game about matching 3D model structures with a 2D hexagon map.
Pathogen Warrior is a puzzle game about matching 3D model structures with a 2D hexagon map. It was one of the entrants to the 4th Ludum Dare 48-hour game development competition.
The theme of the competition was "Infection". In Pathogen Warrior, the players task is to match rotating 3D pathogen structures with a 2D model using a hexagon map.
The time to accomplish the task is limited, and after successfully completing one pathogen, the player is advanced to next level, which has a more challenging pathogen.
Enhancements:
- Updated music file.
- Added Linux Makefile (contributed by Ion).
- Added license notices to all source files.

Enhancements

• Some bugs are fixed
• A menu is added

Requirements:

• Python
• Pygame

aewm is a minimalist window manager for X11. It has no nifty features, but is light on resources and extremely simple in appearance.
It should eventually make a good reference implementation of the ICCCM. A few separate programs are included to handle running programs, switching between windows, etc.
aewm was based on 9wm, which has also inspired lwm, larswm, and w9wm. It has in turn inspired the following window managers:
Sapphire/aewm++ (defunct?)
alloywm
evilwm
maewm (defunct?)
Oroborus
phluid
swm
Clementine
WindowLab
YeahWM
Spook (defunct?)
wimpwm
Some other minimal WMs worth checking out are:
wm2
wmii (no relation!)
PLWM
YAWM (defunct?)
ratpoison
Anarchy
Ion
Enhancements:
- UTF-8 support was added, and various EWMH bugs were fixed.

Chromium B.S.U. is a fast paced, arcade-style, top-scrolling space shooter.
You are captain of the cargo ship Chromium B.S.U., responsible for delivering supplies to our troops on the front line. Your ship has a small fleet of robotic fighters which you control from the relative safety of the Chromium vessel.
Your Mission:
- Do not let ANY enemy ships get past your fighters! Each enemy ship that makes it past the bottom of the screen will attack the Chromium, and you lose a fighter.
- Use your fighters as weapons! Crash into enemies to destroy them before they can get past you.
- Strategic suicide is a powerful tactic! When the Chromium launches a new fighter, it releases a high energy burst which destroys all enemies in range.
- Self-destruct to preserve your ammunition! A double-right-click will cause your current fighter to self-destruct. Before the ship blows up, it ejects its ammunition so that the next fighter can pick it up.
Ammunition:
MACHINE GUN
Otherwise known as the pea shooter. But youll miss em when theyre gone.
ION CANNON
This gun slices through your enemies and keeps on going.
PLASMA REPEATER
Your most powerful weapon. The plasma ammunition runs out quickly, however.
Items:
BIG RED BUTTON
The ultimate weapon. Double right-click or press the 0 key twice to eject the fighters ammunition and self-destruct.
Power ups:
SHIELD REPLENISH
The penguin protects you. Grab this power up to restore shields to 100%.
Let it pass through for big points.
DAMAGE REPAIR
The penguin gives you life. Grab this power up to repair all damage to your fighter.
Let it pass through for big points.
SUPER SHIELDS / EXTRA LIFE
Restores shields to 100% and gives you temporary invulnerability.
TIP: If you let it pass through the bottom of the screen, you will be rewarded with an extra fighter.
Chromium B.S.U. command line options:
-f/--fullscreen : run in fullscreen mode
-w/--window : run in windowed mode
-v/--vidmode : mode 0 = 512 x 384
: 1 = 640 x 480
: 2 = 800 x 600
: 3 = 1024 x 768
: 4 = 1280 x 1024
-na/--noaudio : do not initialize audio

Ion is a tiling (no overlapping windows) window manager which also has PWM-style tabbed frames which can contain multiple client windows.
These features help to keep windows organized and to switch quickly between them. Ion was designed primarily as an efficient and unobtrusive window manager for users who prefer the keyboard
Main features:
- Tiling workspaces with tabbed frames, as discussed above.
- Designed to be primarily used from the keyboard.
- Fully documented configuration and scripting interface on top of the lightweight Lua extension language.
- Modular design. The main binary implements only basic window manager functionality. Actual window management policies are implemented by dynamically loaded workspace and other modules.
- The query module implements a line editor similar to mini buffers in many text editors. It is used to implement many different queries with tab-completion support: show manual page, run program, open SSH session, view file, goto named client window or workspace, etc.
- To run those few particularly badly behaving programs, Ion also supports conventional workspaces of the PWM flavour through the floatws module. This module is also used to implement PWM2 on top of the Ion core library.
- Other modules include the drawing engine, dock module for Window Maker dockapp support, menu module and, of course, the tiled workspaces module.
- Full screen client windows are seen as workspaces on their own. It is possible to switch to a normal workspace while keeping several client windows in full screen state and also switch clients that do not themselves support full screen mode to this state.
Ion is not perfect and certainly not for everyone, but neither is any user interface. To ultimately solve usability problems to the extent possible with current technologies, applications should be written independent of their user interfaces and the UIs should be built according to the users preferences based on a high-level semantic description of commands provided by the application.
Ion is, however, improving all the time and if you take the time to get used to it, you should hardly ever have to touch the mouse again to move between windows. Just remember that not all programs will play nicely with Ion because of presumptions about the window management model and even incompliance to the ICCCM. Terminal programs should work better than ever before, at least.
Enhancements:
- This third "rc" release again simply fixes some minor problems in the previous release.

MassSpec::ViewSpectrum::RealVsHypPeptide is a Perl module to view a real mass spectrum on the same graph as a hypothetical spectrum generated by fragmenting a peptide in silico.

SYNOPSIS

use MassSpec::ViewSpectrum::RealVsHypPeptide;
open GRAPHIC, ">mygraphic.png" or die "Unable to open output filen";
binmode GRAPHIC;

my @masses = (78.1,81.1,81.7,85.4,86.8,88.8,89.4,97.6,99.0,99.4,108.7,112.1,129.1,
130.1,132.1,147.7,157.1,158.1,159.1,169.1,171.1,175.1,187.1,229.1,246.2,258.1,
266.0,327.2,328.2,345.2,415.2,426.2,432.2,531.2,559.3,623.4,639.3,643.3,644.4,
645.0,647.5,686.4,687.4,689.4);
my @intensities = (8.7,7.7,7.3,10.5,7.7,7.3,8.4,8.0,9.1,9.1,7.3,29.0,12.6,7.3,8.0,
7.7,11.9,9.8,10.1,7.3,10.5,131.0,9.4,50.3,22.7,44.7,16.8,30.4,18.2,53.1,25.5,
15.7,7.7,14.0,46.8,38.4,7.3,11.5,8.7,7.3,8.7,7.3,24.8,194.2);
my $peptide = "RTSVAR";

my $vs = MassSpec::ViewSpectrum::RealVsHypPeptide->new($peptide, @masses,@intensities);
$vs->set(yaxismultiplier => 1.8); # a sample tweak to adjust the output
$vs->set(title => "BSA-689 -- " . $peptide);

my $output = $vs->plot();
print GRAPHIC $output;
close GRAPHIC;

MassSpec::ViewSpectrum::RealVsHypPeptide - View a real mass spectrum on the same graph as a hypothetical spectrum generated by fragmenting a peptide in silico. The in silico fragmention is performed by generating all of the possible peptides which contain either the amino-terminal or carboxyl-terminal amino acids.

Negative peak intensity values are permitted; this permits the drawing of "pseudospectra" which, for example, illustrate peaks present in one spectrum but missing in another. Note that these negative peaks have no true intensities, but in some cases we assign different heights to illustrate the differences among different hypothetical peaks. In addition, pseudocoloring of both positive and negative peaks is performed to illustrate what type of ion that peak represents. In some cases these ions are labelled explicitly, although in practice it is best to minimize this labelling to avoid excessive clutter.

This program places the required number of sodium ions around a system of electric charges, e.g., the atoms of a biological macromolecule (protein, DNA, protein/DNA complex).

The ions are placed in the nodes of a cubic grid, in which the electrostatic energy achieves the smallest values. The energy is re-computed after placement of each ion. A simple Coulombic formula is used for the energy:

Energy(R) = Sum(i_atoms,ions) Q_i / |R-R_i|

All the constants are dropped out from this formula, resulting in some weird energy units; that doesnt matter for the purpose of energy comparison. To speed the program up, the atoms of the macromolecule are re-located to the grid nodes, closest to their original locations.

The resulting error is believed to be minor, compared to that resulting from the one-by-one ions placement, or from using the simplified energy function. The coordinates of the placed ions are printed out in the PDB format for further usage.

It is recommended that the placed ions are equilibrated in a separate Monte Carlo or Molecular Dynamics simulation. Trivial modifications to the program should allow the placement of any combination of multivalent ions of different charges.