tribemcl 1.4
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Bio::Tools::Run::TribeMCL 1.4
Bio::Tools::Run::TribeMCL is a method for clustering proteins into related groups, which are termed protein families. more>>
Bio::Tools::Run::TribeMCL is a method for clustering proteins into related groups, which are termed protein families.
SYNOPSIS
use Bio::Tools::Run::TribeMCL;
use Bio::SearchIO;
# 3 methods to input the blast results
# straight forward raw blast output (NCBI or WU-BLAST)
my @params = (inputtype=>blastfile);
# OR
# markov program format
# protein_id1 protein_id2 evalue_magnitude evalue_factor
# for example:
# proteins ENSP00000257547 and ENSP00000261659
# with a blast score evalue of 1e-50
# and proteins O42187 and ENSP00000257547
# with a blast score evalue of 1e-119
# entry would be
my @array = [[qw(ENSP00000257547 ENSP00000261659 1 50)],
[qw(O42187 ENSP00000257547 1 119)]];
my @params = (pairs=>@array,I=>2.0);
# OR
# pass in a searchio object
# slowest of the 3 methods as it does more rigourous parsing
# than required for us here
my $sio = Bio::SearchIO->new(-format=>blast,
-file=>blast.out);
my @params=(inputtype=>searchio,I=>2.0);
# you can specify the path to the executable manually in the following way
my @params=(inputtype=>blastfile,I=>2.0,
mcl=>/home/shawn/software/mcl-02-150/src/shmcl/mcl,
matrix=>/home/shawn/software/mcl-02-150/src/contrib/tribe/tribe-matrix);
my $fact = Bio::Tools::Run::TribeMCL->new(@params);
# OR
$fact->matrix_executable(/home/shawn/software/mcl-02-150/src/contrib/tribe/tribe-matrix);
$fact->mcl_executable(/home/shawn/software/mcl-02-150/src/shmcl/mcl);
# to run
my $fact = Bio::Tools::Run::TribeMCL->new(@params);
# Run the program
# returns an array reference to clusters where members are the ids
# for example :2 clusters with 3 members per cluster:
# $fam = [ [mem1 mem2 mem3],[mem1 mem2 mem3]]
# pass in either the blastfile path/searchio obj/the array ref to scores
my $fam = $fact->run($sio);
# print out your clusters
for (my $i = 0; $i
print "Cluster $i t ".scalar(@{$fam->[$i]})." membersn";
foreach my $member (@{$fam->[$i]}){
print "t$membern";
}
}
This clustering is achieved by analysing similarity patterns between proteins in a given dataset, and using these patterns to assign proteins into related groups. In many cases, proteins in the same protein family will have similar functional properties.
Enhancements:
- Perl
<<lessSYNOPSIS
use Bio::Tools::Run::TribeMCL;
use Bio::SearchIO;
# 3 methods to input the blast results
# straight forward raw blast output (NCBI or WU-BLAST)
my @params = (inputtype=>blastfile);
# OR
# markov program format
# protein_id1 protein_id2 evalue_magnitude evalue_factor
# for example:
# proteins ENSP00000257547 and ENSP00000261659
# with a blast score evalue of 1e-50
# and proteins O42187 and ENSP00000257547
# with a blast score evalue of 1e-119
# entry would be
my @array = [[qw(ENSP00000257547 ENSP00000261659 1 50)],
[qw(O42187 ENSP00000257547 1 119)]];
my @params = (pairs=>@array,I=>2.0);
# OR
# pass in a searchio object
# slowest of the 3 methods as it does more rigourous parsing
# than required for us here
my $sio = Bio::SearchIO->new(-format=>blast,
-file=>blast.out);
my @params=(inputtype=>searchio,I=>2.0);
# you can specify the path to the executable manually in the following way
my @params=(inputtype=>blastfile,I=>2.0,
mcl=>/home/shawn/software/mcl-02-150/src/shmcl/mcl,
matrix=>/home/shawn/software/mcl-02-150/src/contrib/tribe/tribe-matrix);
my $fact = Bio::Tools::Run::TribeMCL->new(@params);
# OR
$fact->matrix_executable(/home/shawn/software/mcl-02-150/src/contrib/tribe/tribe-matrix);
$fact->mcl_executable(/home/shawn/software/mcl-02-150/src/shmcl/mcl);
# to run
my $fact = Bio::Tools::Run::TribeMCL->new(@params);
# Run the program
# returns an array reference to clusters where members are the ids
# for example :2 clusters with 3 members per cluster:
# $fam = [ [mem1 mem2 mem3],[mem1 mem2 mem3]]
# pass in either the blastfile path/searchio obj/the array ref to scores
my $fam = $fact->run($sio);
# print out your clusters
for (my $i = 0; $i
print "Cluster $i t ".scalar(@{$fam->[$i]})." membersn";
foreach my $member (@{$fam->[$i]}){
print "t$membern";
}
}
This clustering is achieved by analysing similarity patterns between proteins in a given dataset, and using these patterns to assign proteins into related groups. In many cases, proteins in the same protein family will have similar functional properties.
Enhancements:
- Perl
Download (0.81MB)
Added: 2007-02-22 License: Perl Artistic License Price:
975 downloads
RIFE 1.4
RIFE offers an alternative approach to web application development and design. more>>
RIFE project is a full-stack web application framework with tools and APIs to implement most common web features. Each of its toolkits is usable by itself and together they offer powerful integrated features that boost your productivity.
RIFE ensures that every declaration and definition is handled in one place in the code. This simplifies the developers task by reducing code replication, enforcing consistency, and easing maintenance.
RIFEs design provides the best of request-based and component-based approaches and blends them together in a consistent component object model. The web engine provides a solution that values maintainability without compromising on productivity.
Through a centralized site structure, an application can be split up into easily reusable binary modules that can be seamlessly integrated into other projects.
There are currently two major schools of web application development frameworks: request-based and component-based.
Request-based frameworks are very close to the original CGI specification. They use controllers and actions that directly handle incoming requests. Each request is fundamentally stateless.
With the introduction of server-side sessions, a certain degree of statefulness has been achieved. The different frameworks basically differentiate themselves by the way they map logic to URLs and how data is structured and provided to the developer.
Component-based frameworks abstract the developer away from the internals of the request handling and encapsulate the logic into reusable components, often independent from the web medium.
The state is automatically handled by the framework, based on the data that is present in each component instance. Together with some form of event handling, this development model is very similar to the features offered by desktop GUI toolkits. The different frameworks basically differentiate themselves by the provided component API and how components are combined together.
RIFE combines both by taking control of the entire data and logic flow in a request-based model. Developers remain close to the architecture of CGI applications and have full control over URLs, forms, parameters, cookies and pathinfos.
However, instead of mapping actions and controllers directly to the request, RIFE provides a component object model that behaves identically in many different situations such as individual pages, intercepted requests, portal-like page fragments and integratable widgets.
Components can be wired together and be packaged as groups that are components in their own right. They can be distributed separately and be seamlessly integrated into any other RIFE project. This provides the same form of reusability as component-based frameworks, but with the raw control of the request-based approach.
Enhancements:
- Transparent meta data merging has been implemented, which is a creative solution to keeping POJOs pure and still make it possible to declare dynamic meta data in plain Java.
- Other highlights of this release are: new (X)HTML template tag syntaxes, experimental Ajax support with DWR integration, embedded element priorities, strict pathinfo mapping, deprecated CmfProperty and CmfValidation, flowlink-specific datalinks, mail queue support for authentication and SSL, support for setting reflexive outputs and globalvars across submissions, and several bugfixes.
<<lessRIFE ensures that every declaration and definition is handled in one place in the code. This simplifies the developers task by reducing code replication, enforcing consistency, and easing maintenance.
RIFEs design provides the best of request-based and component-based approaches and blends them together in a consistent component object model. The web engine provides a solution that values maintainability without compromising on productivity.
Through a centralized site structure, an application can be split up into easily reusable binary modules that can be seamlessly integrated into other projects.
There are currently two major schools of web application development frameworks: request-based and component-based.
Request-based frameworks are very close to the original CGI specification. They use controllers and actions that directly handle incoming requests. Each request is fundamentally stateless.
With the introduction of server-side sessions, a certain degree of statefulness has been achieved. The different frameworks basically differentiate themselves by the way they map logic to URLs and how data is structured and provided to the developer.
Component-based frameworks abstract the developer away from the internals of the request handling and encapsulate the logic into reusable components, often independent from the web medium.
The state is automatically handled by the framework, based on the data that is present in each component instance. Together with some form of event handling, this development model is very similar to the features offered by desktop GUI toolkits. The different frameworks basically differentiate themselves by the provided component API and how components are combined together.
RIFE combines both by taking control of the entire data and logic flow in a request-based model. Developers remain close to the architecture of CGI applications and have full control over URLs, forms, parameters, cookies and pathinfos.
However, instead of mapping actions and controllers directly to the request, RIFE provides a component object model that behaves identically in many different situations such as individual pages, intercepted requests, portal-like page fragments and integratable widgets.
Components can be wired together and be packaged as groups that are components in their own right. They can be distributed separately and be seamlessly integrated into any other RIFE project. This provides the same form of reusability as component-based frameworks, but with the raw control of the request-based approach.
Enhancements:
- Transparent meta data merging has been implemented, which is a creative solution to keeping POJOs pure and still make it possible to declare dynamic meta data in plain Java.
- Other highlights of this release are: new (X)HTML template tag syntaxes, experimental Ajax support with DWR integration, embedded element priorities, strict pathinfo mapping, deprecated CmfProperty and CmfValidation, flowlink-specific datalinks, mail queue support for authentication and SSL, support for setting reflexive outputs and globalvars across submissions, and several bugfixes.
Download (2.5MB)
Added: 2006-03-06 License: LGPL (GNU Lesser General Public License) Price:
1329 downloads
Templayer 1.4
Templayer is a layered template library for Python. more>>
Templayer is a layered template library for Python. Templayer currently supports only HTML generation, but its simple design is easily extended to support other file formats.
Templayer was created to offer an alternative to the more common ways of generating dynamic HTML: embedding code within the HTML (PHP etc.) , or embedding HTML within code (traditional CGI).
Neither of these methods allow for a clean separation of the form, or layout, of a page and the function of page generation. Instead of mixing HTML and Python, two rich and extremely expressive languages, we can add a small amount of syntax to each and keep the two separate and coherent.
Enhancements:
- Added a django_form convenience function for using Templayer with the Django web frameworks FormWrapper objects.
- Added an allow_degenerate parameter to Template.__init__. If set to True then a template file that is missing a contents block will be accepted and not cause an exception to be raised.
- Added a special layer name * that treats the entire contents of a template file as a layer.
- Added two new HTML Markup elements: - (pluralize,count,singular_markup,plural_markup) inserts singular_markup if count equals one, and plural_markup otherwise. - (&,entity) inserts the given HTML entity where valid entity values include "gt", "#161" and "#xA9".
- FileLayer.close now returns the file object to which it wrote.
- This simplifies the code required to use Templayer in Django view functions.
- Fixed a really obvious bug in the html_href function.
<<lessTemplayer was created to offer an alternative to the more common ways of generating dynamic HTML: embedding code within the HTML (PHP etc.) , or embedding HTML within code (traditional CGI).
Neither of these methods allow for a clean separation of the form, or layout, of a page and the function of page generation. Instead of mixing HTML and Python, two rich and extremely expressive languages, we can add a small amount of syntax to each and keep the two separate and coherent.
Enhancements:
- Added a django_form convenience function for using Templayer with the Django web frameworks FormWrapper objects.
- Added an allow_degenerate parameter to Template.__init__. If set to True then a template file that is missing a contents block will be accepted and not cause an exception to be raised.
- Added a special layer name * that treats the entire contents of a template file as a layer.
- Added two new HTML Markup elements: - (pluralize,count,singular_markup,plural_markup) inserts singular_markup if count equals one, and plural_markup otherwise. - (&,entity) inserts the given HTML entity where valid entity values include "gt", "#161" and "#xA9".
- FileLayer.close now returns the file object to which it wrote.
- This simplifies the code required to use Templayer in Django view functions.
- Fixed a really obvious bug in the html_href function.
Download (0.027MB)
Added: 2006-09-28 License: LGPL (GNU Lesser General Public License) Price:
1122 downloads
Primes 1.4
calculates the prime numbers 1..N, tells you if N is prime etc. Prints tables of primes. Computes the prime just below or above N. calculates the prime numbers 1..N, tells you if N is prime etc. It is useful in computing optimal Hashtable sizes. Java source included. more>>
Primes - calculates the prime numbers 1..N, tells you if N is prime etc.
Prints tables of primes.
Computes the prime just below or above N.
It is useful in computing optimal Hashtable sizes.
Java source included.
Enhancements:
Version 1.4
mostly cosmetic, more documentation, tidy source.
System Requirements:<<less
Download (461Kb)
Added: 2006-03-06 License: Free Price: Free
15 downloads
rexima 1.4
rexima is a curses-based interactive mixer which can also be used from the command-line. more>>
rexima is a curses-based interactive mixer which can also be used from the command-line. It runs on any terminal with a screen size of 80x24 or greater. Its intended to be a simple, general, usable mixer without all the chrome and colours usually present in other mixers.
Also, it gives a numeric level readout (as well as the sliders), unlike most interactive mixers
Ive used. It should work on any terminal with a screen size of at least 80x24.
Enhancements:
- Version 1.4.
- rexima.c (usage_help): corrected slight misalignment of usage lines.
- rexima.c (getoptn): added an old getopt() replacement of mine, so that we avoid glibcs one treating level decrements as unrecognised options. Thanks to Alexandra Walford for spotting the bug.
<<lessAlso, it gives a numeric level readout (as well as the sliders), unlike most interactive mixers
Ive used. It should work on any terminal with a screen size of at least 80x24.
Enhancements:
- Version 1.4.
- rexima.c (usage_help): corrected slight misalignment of usage lines.
- rexima.c (getoptn): added an old getopt() replacement of mine, so that we avoid glibcs one treating level decrements as unrecognised options. Thanks to Alexandra Walford for spotting the bug.
Download (0.015MB)
Added: 2006-08-02 License: GPL (GNU General Public License) Price:
1178 downloads
BibShelf 1.4.0
BibShelf is a book organizer integrating well with the GNOME desktop environment. more>>
BibShelf is a book organizer integrating well with the GNOME desktop environment.
BibShelf project helps you to keep track of your book collection. You can fill in such things as the book summary, review, rating and the ISBN.
Never forget when it was that you read a book, BibShelf lets you save the date so you do no longer need to waste your brain capacity for storing this information.
<<lessBibShelf project helps you to keep track of your book collection. You can fill in such things as the book summary, review, rating and the ISBN.
Never forget when it was that you read a book, BibShelf lets you save the date so you do no longer need to waste your brain capacity for storing this information.
Download (0.45MB)
Added: 2006-02-17 License: GPL (GNU General Public License) Price:
1344 downloads
athenaCL 1.4.5
athenaCL is a music analysis and algorithmic composition program. more>>
athenaCL is a music analysis and algorithmic composition program. The system can be scripted and embedded, and includes integrated instrument libraries, post-tonal and microtonal pitch modeling tools, multiple-format graphical outputs, and musical output in Csound, MIDI, audio file, XML, and text formats.
Musical parts are deployed as Textures, layered surface-defining objects containing numerous independent ParameterObjects to control pitch, tempo, rhythm, amplitude, panning, and instrument (Csound) parameters. The system includes an integrated library of Csound instruments, and supports output for external Csound instruments, MIDI, and a variety of alternative formats. Over sixty specialized Generator, Rhythm, and Filter ParameterObjects provide tools for stochastic, chaotic, cellular automata based, markov based, wave-form, fractional noise (1/f), genetic, Xenakis sieve, linear and exponential break-point segments, masks, and various other algorithmic models. ParameterObjects can be embedded in other ParameterObjects to provide powerful dynamic and masked value generation. Textures can be combined and edited, and tuned with algorithmic Temperament objects. Texture Clones allow the filtering and processing of Texture events, performing transformations not possible with parameter generation alone.
The analytic and algorithmic systems use Path objects for organizing and sharing pitch groups. Paths provide simultaneous representations of ordered content groups in set-class, pitch-class space, and pitch space. Paths may contain numerous PathVoices (voice leadings) and may be analyzed with both set-class similarity measures and voice leading rankings. As a reference utility, pitch groups can be searched, analyzed, and compared with a wide variety of tools
<<lessMusical parts are deployed as Textures, layered surface-defining objects containing numerous independent ParameterObjects to control pitch, tempo, rhythm, amplitude, panning, and instrument (Csound) parameters. The system includes an integrated library of Csound instruments, and supports output for external Csound instruments, MIDI, and a variety of alternative formats. Over sixty specialized Generator, Rhythm, and Filter ParameterObjects provide tools for stochastic, chaotic, cellular automata based, markov based, wave-form, fractional noise (1/f), genetic, Xenakis sieve, linear and exponential break-point segments, masks, and various other algorithmic models. ParameterObjects can be embedded in other ParameterObjects to provide powerful dynamic and masked value generation. Textures can be combined and edited, and tuned with algorithmic Temperament objects. Texture Clones allow the filtering and processing of Texture events, performing transformations not possible with parameter generation alone.
The analytic and algorithmic systems use Path objects for organizing and sharing pitch groups. Paths provide simultaneous representations of ordered content groups in set-class, pitch-class space, and pitch space. Paths may contain numerous PathVoices (voice leadings) and may be analyzed with both set-class similarity measures and voice leading rankings. As a reference utility, pitch groups can be searched, analyzed, and compared with a wide variety of tools
Download (8.4MB)
Added: 2007-08-10 License: GPL (GNU General Public License) Price:
805 downloads
Clok 1.4
Clok is a graphical Java application which brings a new way of viewing the time. more>>
Clok is a graphical Java application which brings a new way of viewing the time.
It isnt for everyone though and it is not meant to replace clocks, it is meant to be used in concert with them.
Clok runs as a Java application, however it is implemented as a JPanel so any Swing application can incorporate a clok into itself.
Also, there is Clok/PHP which generates PNGs for incorporation into web pages.
How do I use Clok?
If you download the jar, the easiest thing to do is just run the jar like so:
$ java -jar clok.jar
That will produce a list of time zones your java runtime supports. Pick the one that most closely matches your locality and add that as a command line parameter. You can actually add as many as you want.
$ java -jar clok.jar America/Los_Angeles
Enhancements:
- Clok/PHP supports background images
- Clok resizing and layout fixed to work better in 1.4
<<lessIt isnt for everyone though and it is not meant to replace clocks, it is meant to be used in concert with them.
Clok runs as a Java application, however it is implemented as a JPanel so any Swing application can incorporate a clok into itself.
Also, there is Clok/PHP which generates PNGs for incorporation into web pages.
How do I use Clok?
If you download the jar, the easiest thing to do is just run the jar like so:
$ java -jar clok.jar
That will produce a list of time zones your java runtime supports. Pick the one that most closely matches your locality and add that as a command line parameter. You can actually add as many as you want.
$ java -jar clok.jar America/Los_Angeles
Enhancements:
- Clok/PHP supports background images
- Clok resizing and layout fixed to work better in 1.4
Download (0.006MB)
Added: 2006-09-25 License: GPL (GNU General Public License) Price:
1126 downloads
RPilot 1.4.2
RPilot project is an interpreter for the IEEE-standard language PILOT. more>>
RPilot project is an interpreter for the IEEE-standard language PILOT.
RPilot is an interpreter for the IEEE-standard programming language PILOT written in portable C.
PILOT is a language that was designed in the 1960s to support computer-aided instruction and is very simple to learn.
RPilot comes with an introduction to the language and several examples.
Enhancements:
- Fix usage of `isblank(), a GNU extension (Thanks to Patrick Eaton)
- Add some #defines to rpilot.h to replace a few hard-coded constants
- RPilot is over 4 years old. Wow.
<<lessRPilot is an interpreter for the IEEE-standard programming language PILOT written in portable C.
PILOT is a language that was designed in the 1960s to support computer-aided instruction and is very simple to learn.
RPilot comes with an introduction to the language and several examples.
Enhancements:
- Fix usage of `isblank(), a GNU extension (Thanks to Patrick Eaton)
- Add some #defines to rpilot.h to replace a few hard-coded constants
- RPilot is over 4 years old. Wow.
Download (0.036MB)
Added: 2006-11-02 License: GPL (GNU General Public License) Price:
1086 downloads
Prasi 1.4
Prasi is a single-sign-on system for your Perl or PHP scripts, similar to MS Passport. more>>
Prasi is a Protocol for Remote Authentication and Shared Information.
Prasi is a single-sign-on system for your Perl or PHP scripts, similar to MS Passport. All your enabled services can save and share user profile data, and need not be one the same physical server. Available in 7 languages.
Prasi was originally written as an in-house tool to power our internal-use web applications. Due to one of the tools now being publically released (Wefis) it was decided to make Prasi an open-source project, despite its similarity to other existing open-source projects.
Prasi can be used on two levels. Firstly, it enables all CGI (Perl or PHP) scripts residing on any server to perform user management without the hassle of user management. One perl procedure call, and the browsing user is identified or challenged. The exact behaviour is easily customisable.
On the second level, Prasi is also able to keep track of user data (for example, profiles) and seamlessly share that profile information with other Prasi-enabled scripts. Using Prasi in this way gives scripts the power of mySQL and other types of databases without needing to manage the data themselves. Its quite nearly magic.
For the end user, one login, one password - all Prasi-enabled scripts instantly know who the user is and customise content accordingly.
Enhancements:
- This release adds minor bugfixes and increased compatibility with "cgi-bin"-type systems.
<<lessPrasi is a single-sign-on system for your Perl or PHP scripts, similar to MS Passport. All your enabled services can save and share user profile data, and need not be one the same physical server. Available in 7 languages.
Prasi was originally written as an in-house tool to power our internal-use web applications. Due to one of the tools now being publically released (Wefis) it was decided to make Prasi an open-source project, despite its similarity to other existing open-source projects.
Prasi can be used on two levels. Firstly, it enables all CGI (Perl or PHP) scripts residing on any server to perform user management without the hassle of user management. One perl procedure call, and the browsing user is identified or challenged. The exact behaviour is easily customisable.
On the second level, Prasi is also able to keep track of user data (for example, profiles) and seamlessly share that profile information with other Prasi-enabled scripts. Using Prasi in this way gives scripts the power of mySQL and other types of databases without needing to manage the data themselves. Its quite nearly magic.
For the end user, one login, one password - all Prasi-enabled scripts instantly know who the user is and customise content accordingly.
Enhancements:
- This release adds minor bugfixes and increased compatibility with "cgi-bin"-type systems.
Download (0.21MB)
Added: 2007-02-03 License: GPL (GNU General Public License) Price:
996 downloads
iBookshelf 0.1.4
iBookshelf is an application for cataloging a book collection and designing bookshelves. more>>
iBookshelf is an application for cataloging your book collection and designing bookshelves based for it. Written in C#/Mono using the Gtk# graphical toolkit. This project is specifically an experiment in computer aided design
Main features:
- ISBN entry using CueCat, standard barcode scanner, or manual entry.
- Automatic data fetch using Amazon web services
- Manual book entry for non-catalogued books
- Bookshelf design based on most efficient book order.
<<lessMain features:
- ISBN entry using CueCat, standard barcode scanner, or manual entry.
- Automatic data fetch using Amazon web services
- Manual book entry for non-catalogued books
- Bookshelf design based on most efficient book order.
Download (0.30MB)
Added: 2005-04-20 License: GPL (GNU General Public License) Price:
1648 downloads
Murdoc 1.4
Murdoc is a system for documenting system management departments. more>>
Murdoc project is a system for documenting system management departments.
All documents of a system management department can be put in Murdoc for convenient browsing and searching.
It comes with several tools for creating content, like a Unix documenter (for automatically documenting Unix servers on a daily basis), a Windows documenter (for automatically documenting Microsoft Windows servers on a daily basis), and a Logbook writer (for entering logbook entries by the system administrators). A searching feature is included.
Main features:
- UNIX documenter (for automatically documenting UNIX servers on a daily basis)
- Windows documenter (for automatically documenting Microsoft Windows servers on a daily basis)
- Logbook writer (for entering logbook entries by the system administrators)
<<lessAll documents of a system management department can be put in Murdoc for convenient browsing and searching.
It comes with several tools for creating content, like a Unix documenter (for automatically documenting Unix servers on a daily basis), a Windows documenter (for automatically documenting Microsoft Windows servers on a daily basis), and a Logbook writer (for entering logbook entries by the system administrators). A searching feature is included.
Main features:
- UNIX documenter (for automatically documenting UNIX servers on a daily basis)
- Windows documenter (for automatically documenting Microsoft Windows servers on a daily basis)
- Logbook writer (for entering logbook entries by the system administrators)
Download (8.1MB)
Added: 2006-10-05 License: GPL (GNU General Public License) Price:
1114 downloads
MyClient 3.1.4
MyClient is an open source web client interface for the MySQL database. more>>
MyClient is an open source web client interface for the MySQL database.
MyClient is a simple MySQL web client interface. Largely it is a web-ified version of the "MySQL" command-line query interface with the added benefit of multiple connection interfaces.
It does not contain a lot of bells and whistles like some other MySQL administrative oriented programs such as the very good phpMyAdmin. The target audience of MyClient are those who want a fast, simple web based MySQL query interface and/or those who dont want or need the helper tools provided by a full bore administrative package.
MyClient is ideally suited for those who have web sites that are virtually hosted and they only have access to their database(s), not the entire MySQL database server. Its also ideal for those who have SSH access to their server, but because of an idle timeout frequently get disconnected.
This was one of the primary reason this application was originally developed. MyClient allows you to quickly and easily connect and rule your little corner of the MySQL universe.
Main features:
- Runs with PHP Register Globals OFF.
- Validates as XHTML Strict Compliant.
- Validates as CSS Compliant.
- CSS control of display layout.
- Session support so you may leave MyClient and return without having to login again.
- Multiple (with a default of 5) SQL query interface windows. Each interface stores its query window contents in session so you can switch between interfaces without losing your current work.
- Ability to save and load queries. These queries can either be saved on the server, downloaded or e-mailed to multiple recipients.
- One click query result sorting by simply clicking on the column name.
- One button table describe and indexing information.
- One button database switching functionality.
- Ability to save query results. These results can either be saved on the server, downloaded or e-mailed to multiple recipients.
- Fully localized to allow all displaying in the language of your choice. Currently MyClient includes English, German and Spanish language files.
Enhancements:
- Saving queries or query results via download resulted in the interface HTML being appended after the data.
- This update fixes this issue.
<<lessMyClient is a simple MySQL web client interface. Largely it is a web-ified version of the "MySQL" command-line query interface with the added benefit of multiple connection interfaces.
It does not contain a lot of bells and whistles like some other MySQL administrative oriented programs such as the very good phpMyAdmin. The target audience of MyClient are those who want a fast, simple web based MySQL query interface and/or those who dont want or need the helper tools provided by a full bore administrative package.
MyClient is ideally suited for those who have web sites that are virtually hosted and they only have access to their database(s), not the entire MySQL database server. Its also ideal for those who have SSH access to their server, but because of an idle timeout frequently get disconnected.
This was one of the primary reason this application was originally developed. MyClient allows you to quickly and easily connect and rule your little corner of the MySQL universe.
Main features:
- Runs with PHP Register Globals OFF.
- Validates as XHTML Strict Compliant.
- Validates as CSS Compliant.
- CSS control of display layout.
- Session support so you may leave MyClient and return without having to login again.
- Multiple (with a default of 5) SQL query interface windows. Each interface stores its query window contents in session so you can switch between interfaces without losing your current work.
- Ability to save and load queries. These queries can either be saved on the server, downloaded or e-mailed to multiple recipients.
- One click query result sorting by simply clicking on the column name.
- One button table describe and indexing information.
- One button database switching functionality.
- Ability to save query results. These results can either be saved on the server, downloaded or e-mailed to multiple recipients.
- Fully localized to allow all displaying in the language of your choice. Currently MyClient includes English, German and Spanish language files.
Enhancements:
- Saving queries or query results via download resulted in the interface HTML being appended after the data.
- This update fixes this issue.
Download (0.063MB)
Added: 2007-06-20 License: GPL (GNU General Public License) Price:
862 downloads
CitrusDB 1.1.4
CitrusDB is a Web-based customer database application that uses PHP and a database backend to keep track of customer information more>>
CitrusDB is an open source customer database application that uses PHP and a database back-end (currently MySQL).
This software can keep track of customer information, CRM, services, products, billing, and customer service information. The program will run on any PHP enabled web server.
This software is now in beta. There is still alot of room for tweaking code and making things more streamlined, a whole lot of room. The code of CitrusDB might even be able to be used now for something other than to play around with, but since its beta I wont recommend using it in production yet. For long time users, please note that the initial login name has changed from "test" to "admin" now!
Main features:
- modular functions to allow new pieces to work along side base functions
- security and password access to database on a per user level
- track modifications to customer records made by the database user
- keep general info, mailing address, billing address, and billing info about each customer
- able to assign multiple (unlimited?) services or products to a customer record
- add custom fields for services/product information
- trouble tickets / individual and department notifications
- import / export feature to send billing data back and forth to card processing software
- import from online order data (or online order component)
- search by specified fields
- easy to add and modify services/products
- ability to invoke remote commands to talk to other servers for billing queries, user lookups, etc.
- bill credit card and invoice for monthly, setup fee, onetime charges, 6 month, yearly, etc. billing cycles
- ability for different billing types to be assigned to each product or service that one customer has
<<lessThis software can keep track of customer information, CRM, services, products, billing, and customer service information. The program will run on any PHP enabled web server.
This software is now in beta. There is still alot of room for tweaking code and making things more streamlined, a whole lot of room. The code of CitrusDB might even be able to be used now for something other than to play around with, but since its beta I wont recommend using it in production yet. For long time users, please note that the initial login name has changed from "test" to "admin" now!
Main features:
- modular functions to allow new pieces to work along side base functions
- security and password access to database on a per user level
- track modifications to customer records made by the database user
- keep general info, mailing address, billing address, and billing info about each customer
- able to assign multiple (unlimited?) services or products to a customer record
- add custom fields for services/product information
- trouble tickets / individual and department notifications
- import / export feature to send billing data back and forth to card processing software
- import from online order data (or online order component)
- search by specified fields
- easy to add and modify services/products
- ability to invoke remote commands to talk to other servers for billing queries, user lookups, etc.
- bill credit card and invoice for monthly, setup fee, onetime charges, 6 month, yearly, etc. billing cycles
- ability for different billing types to be assigned to each product or service that one customer has
Download (1.1MB)
Added: 2007-06-29 License: GPL (GNU General Public License) Price:
851 downloads
PictureStories 1.4
PictureStories lets you make little webpages of stories you write where some of the words are replaced with images. more>>
PictureStories lets you make little webpages of stories you write where some of the words are replaced with images which is called rebus. What makes PictureStories cool is that the images are dynamically pulled from popular web-based image search engines (like Google).
Weve seen lots of cute little storybooks for kids that are like this, and we thought itd be neat to be able to do my own. Someone has probably had this idea before, but we couldnt find anything online anywhere, so we wrote it.
<<lessWeve seen lots of cute little storybooks for kids that are like this, and we thought itd be neat to be able to do my own. Someone has probably had this idea before, but we couldnt find anything online anywhere, so we wrote it.
Download (0.18MB)
Added: 2006-06-26 License: Freeware Price:
1215 downloads
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