Free to view software for linux

GO::View is a Perl module that creates a gif or png image for visualizing the GO DAG.

This perl module generates a graphic that displays the parent and child relationships of a selected GO term. It also provides the visualization for the GO::TermFinder perl module created by the Stanford Microarray Database (SMD). This module is useful when analyzing experimental or computational results that produce a set of gene products that may have a common function or process.

SYNOPSIS

use GO::View;

my $goView =

GO::View->new(-goid => $goid,
-ontologyProvider => $ontology,
-annotationProvider => $annotation,
-termFinder => @pvalues,
-aspect => P,
-configFile => $confFile,
-imageDir => "/tmp",
-imageUrlRoot => "http://www.ABC.com/tmp",
-imageName => "GOview.88.png",
-tree => up,
-nodeUrl => $goUrl,
-geneUrl => $geneUrl,
-pvalueCutOff => 0.01,
-imageLabel => "SGD");


argument required expect data and type
-------------------------------------------------------------------------
-goid No A gene ontology ID (GOID).
If nothing is passed in, the module
will use the top goid of each ontology
branch (i.e, goid for
molecular_function, biological_process,
or cellular_component)

-ontologyProvider Yes An ontology provider instance.

-annotationProvider No An annotation provider instance. It is
required for creating tree for GO Term
Finder result.

-termFinder No An array of hash references returned
from findTerms method of
GO::TermFinder module. It is required
for creating tree for GO Term Finder
result.

-aspect No . The aspect of the ontology
provider. It is required for creating
tree for GO Term Finder result.

-configFile Yes The configuration file for setting the
general variables for the graphic
display.

-imageDir Yes The directory for storing the newly
created image file. It must be
world (nobody) readable and writable
if you want to display the image to
the web.

-imageUrlRoot No The url root for the -imageDir. It is
required if you want to display the
image to the web.

-imageName No The image file name. By default, the
name will be something like
GOview.xxxx.png. The xxxx will be
the process id. A suffix for the image (.png
or .gif) should not be provided, as that will
be determined at run time, depending on the
capabilities of the GD library.

-treeType No . The tree type.

1. up => display the ancestor tree
for the given goid.
2. down => display the descendant tree
for the given goid.
By default, it will display the
descendant tree.

-geneUrl No The URL for each Gene to link to.
It needs to have the text in
the url which will be substituted
by the real goid for a node.

-nodeUrl No The url for each GO node to link to.
It needs to have the text in
the url which will be substituted
by the real goid for a node.

-pvalueCutOff No The p-value cutoff for displaying
the graphic for GO Term Finder.
The default is 0.01

-imageLabel No The image label which will appear at
the left bottom corner of the map.
------------------------------------------------------------------------

To display the image on the web:

$goView->showGraph;

To create and return image file name with full path:

my $imageFile = $goView->createImage;

N-View is a network monitor for small and medium-sized networks. It features automatic scanning of subnets for host addresses, monitoring of ICMP responses from all hosts, signalling of timeouts and delays in the GUI and by mail, a portscanner, an SNMP client (MIB browser and trap receiver), a graphical display of network traffic for network interfaces, connectivity to hosts by telnet, HTTP browser, or an arbitrary external program (such as ssh), printing of network diagrams, automatic generation of HTML pages, and more.
Main features:
Simple configuration:
- automatic scan for hosts, based on ICMP ("ping"),
- configurable limits for response delay, timeout and port scan interval,
- individual configuration can be stored in a configuration file;
Graphic display:
- automatic arranging of icons for hosts and subnets (optional),
- arbitrary background pictures for each screen,
- signalling delay and timeout of hosts and subnets with coloured icons,
- graphic display of traffic load for selected network interfaces,
- arbitrary labelling for all icons and windows;
Signalling of status changes on display, acoustic and per e-mail (optional):
- on timeout or delayed reply of a host,
- on changes of the open port status,
- on receiving of SNMP traps;
Management interface, connections to hosts:
- via external browser,
- via internal telnet client,
- via internal SNMP client/browser;
Flexible display:
- showing Subnets as tabbed or cascaded windows,
- coloured printer output of network diagrams,
- network diagrams can be accessed from HTML browsers from inside the network (external HTML server required);

Cache View is an extension which displays Googles Cache, Corals Cache, Wayback Machines Cache and more.

Displays Googles Cache, Corals Cache, Wayback Machines Cache, Dot Cache, Tech Gurus Cache, and Cachebins cache of the current tab open via right-click or Tools menu.

This was made so that if the site is down in any way, especially the Digg effect and Slashdot effect, you can hopefully view it.

ThinkFree Viewer allows you to view ThinkFree or Microsoft Office word processing, spreadsheet, and presentation files without having any other office applications installed. After installing the appropriate Widget simply drag and drop files from your desktop, or copy and paste the Web URL into the ThinkFree Widget.

ThinkFree Widgets allows users to open email attachments with ease, and supports the following file formats: .doc, .rtf, .txt, .xls, .csv, .ppt, and .pps.

TorK project is a Tor Controller for KDE.

TorK allows you to configure, run and update Tor. It also allows you to view the Tor network and choose how you would like to interact with the network.

TorK is very much in an alpha state.

TopJax is essentially the “top” unix utility ported to the web via Ajax using Sack of Ajax. It provides the ability to view system processes, sort processes by various fields, pause/unpause monitoring, and hide idle processes.

TopJax is released under the GPL.

Pdbv output a HTML view of a RPM or dpkg database. Its modular design allows easy addition of others package management database and export format (as xml).
The 1.x.x series are in Bash, the 2.x.x series are in Perl. Obviously, the output generation with 1.x.x is a lot slower than with the 2.x.x. While with the 1.x.x it should run on a daily basis, with the 2.x.x it should run on a hourly basis.
Main features:
- it does not require lucid/gtk+/qt or other big libs.
- it does not require a web server - but it can be used with a web server, as any
- other html files.
- it does not require a X server running, you can use a text mode browser that support
- frames as links.
- it does not require special privileges to access to the output. But access can
- be restricted by using chmod/chown (filesystem) or .htaccess (apache).
- since output is generated by a cronjob, access to the output is as fast as your
- computer is able to read/serve text files.