Free to run in spanish software for linux

SpanishTrans provides a a very simple, complete, fast and clean dictionary, which allows you to translate English to Spanish.

This is a very simple, complete, fast and clean dictionary, which allows you to highlight an English word in the page that youre reading and get immediately the Spanish translation.

No matter if the selected word is a plural, conjugated verb, etc., the translator realizes about the right word showing you its meaning.

Run a web server inside LAN is a simple script to run a WWW server inside a Local Area Network. Run a web server inside LAN script assume all iptables features are compiled statically in the kernel, or all modules are loaded.

Otherwise you may encounter some surprises trying to utilize the more featureful and creative commandlines that Ive come up with.

Sample:

#external and internal interfaces
EXT=eth0
INT=eth1

# clear everything, and create my cascading chains
iptables -F
iptables -N e0
iptables -N tcpin
iptables -N udpin

# e0 is the name of our chain for eth0
iptables -I INPUT -i $EXT -j e0

# OUTPUT Chain
iptables -A OUTPUT -o $EXT -j DROP -p icmp --icmp-type ! echo-request

# remote gnutella queries were really pissing me off one day
# iptables -A OUTPUT -o $EXT -j DROP -p tcp ! --syn --dport 6346
# iptables -A OUTPUT -o $EXT -j DROP -p tcp ! --syn --sport 6346

# $EXT Chain
# a single rule to accept SYN Packets for multiple ports (up to 15)
iptables -A tcpin -j ACCEPT -p tcp --syn -m multiport --destination-ports 873,993,995,143,80,113,21,22,23,25,53

# stateful connection tracking is wonderful stuff
# ESTABLISHED tcp connections are let through
# If we send a SYN out, the ACK is seen as RELATED
# then further communication is accepted by the ESTABLISHED rule
iptables -A e0 -j ACCEPT -m state --state ESTABLISHED
iptables -A e0 -j ACCEPT -m state --state RELATED

# certain ports I simply DROP
iptables -A tcpin -j DROP -p tcp --syn -m multiport --destination-ports 6346,139

# UDP rules...
iptables -A udpin -j DROP -p udp -m multiport --destination-ports 137,27960

# I run a DNS server, so we must accept UDP packets on port 53
iptables -A udpin -j ACCEPT -p udp -m state --state NEW --destination-port 53

# lets log NEW udp packets on ports 1024:65535, then let them through
iptables -A udpin -j LOG -p udp -m state --state NEW --destination-port 1024:65535 --log-level debug --log-prefix UDPNEW --log-ip-options
iptables -A udpin -j ACCEPT -p udp -m state --state NEW --destination-port 1024:65535

# lets log NEW tcp packets on ports 1024:65535, then let them through
iptables -A tcpin -j LOG -p tcp --syn --destination-port 1024:65535 --log-level debug --log-prefix TCPNEW --log-tcp-options --log-ip-options
iptables -A tcpin -j ACCEPT -p tcp --syn --destination-port 1024:65535

# lets log INVALID or NEW tcp packets on priveleged ports, then DROP
# (remember I have certain ACCEPT rules higher up the chain)
iptables -A tcpin -j LOG -p tcp -m state --state INVALID,NEW --destination-port 1:1023 --log-level warn --log-prefix TCPPRIV --log-tcp-options --log-ip-options
iptables -A tcpin -j DROP -p tcp -m state --state INVALID,NEW --destination-port 1:1023

iptables -A e0 -p tcp -j tcpin
iptables -A e0 -p udp -j udpin
iptables -A e0 -j LOG --log-level debug --log-prefix NETFILTER --log-ip-options -m state --state INVALID,NEW
iptables -A e0 -j DROP

# NAT Rules
# I run a web server inside...
iptables -t nat -A PREROUTING -p tcp -i eth0 --dport 80 -j DNAT --to-destination 192.168.1.4:80

Robo Hunt is an action game where you have to run for life and plutonium.

Take all plutonium and dont be caught. The robot hunters are smart and they do not cheat.

Test-Run is an improved test harness for scripts that emit TAP (Test Anything Protocol). It was forked from Test::Harness, and it uses TAP::Parser.

The project is used to analyze the output of the scripts and present it to the user in a summarized form. Test-Run features separation of the test-running backend and the command line frontend, a "runprove" utility for running tests from the command line, a plugin-system, and colors for the summary line.

Bio::Tools::Run::TribeMCL is a method for clustering proteins into related groups, which are termed protein families.
SYNOPSIS
use Bio::Tools::Run::TribeMCL;
use Bio::SearchIO;
# 3 methods to input the blast results
# straight forward raw blast output (NCBI or WU-BLAST)
my @params = (inputtype=>blastfile);
# OR
# markov program format
# protein_id1 protein_id2 evalue_magnitude evalue_factor
# for example:
# proteins ENSP00000257547 and ENSP00000261659
# with a blast score evalue of 1e-50
# and proteins O42187 and ENSP00000257547
# with a blast score evalue of 1e-119
# entry would be
my @array = [[qw(ENSP00000257547 ENSP00000261659 1 50)],
[qw(O42187 ENSP00000257547 1 119)]];
my @params = (pairs=>@array,I=>2.0);
# OR
# pass in a searchio object
# slowest of the 3 methods as it does more rigourous parsing
# than required for us here
my $sio = Bio::SearchIO->new(-format=>blast,
-file=>blast.out);
my @params=(inputtype=>searchio,I=>2.0);
# you can specify the path to the executable manually in the following way
my @params=(inputtype=>blastfile,I=>2.0,
mcl=>/home/shawn/software/mcl-02-150/src/shmcl/mcl,
matrix=>/home/shawn/software/mcl-02-150/src/contrib/tribe/tribe-matrix);
my $fact = Bio::Tools::Run::TribeMCL->new(@params);
# OR
$fact->matrix_executable(/home/shawn/software/mcl-02-150/src/contrib/tribe/tribe-matrix);
$fact->mcl_executable(/home/shawn/software/mcl-02-150/src/shmcl/mcl);
# to run
my $fact = Bio::Tools::Run::TribeMCL->new(@params);
# Run the program
# returns an array reference to clusters where members are the ids
# for example :2 clusters with 3 members per cluster:
# $fam = [ [mem1 mem2 mem3],[mem1 mem2 mem3]]
# pass in either the blastfile path/searchio obj/the array ref to scores
my $fam = $fact->run($sio);
# print out your clusters
for (my $i = 0; $i
print "Cluster $i t ".scalar(@{$fam->[$i]})." membersn";
foreach my $member (@{$fam->[$i]}){
print "t$membern";
}
}
This clustering is achieved by analysing similarity patterns between proteins in a given dataset, and using these patterns to assign proteins into related groups. In many cases, proteins in the same protein family will have similar functional properties.
Enhancements:
- Perl

Bio::Tools::Run::PiseApplication::charge is a Perl module.

Bio::Tools::Run::PiseApplication::charge
Bioperl class for:

CHARGE Protein charge plot (EMBOSS)


Parameters:

(see also:
http://bioweb.pasteur.fr/seqanal/interfaces/charge.html
for available values):


charge (String)

init (String)

seqall (Sequence)
seqall -- protein [sequences] (-seqall)
pipe: seqsfile

window (Integer)
Window (-window)

aadata (String)
Amino acid property data file name (-aadata)

plot (Switch)
Produce graphic (-plot)

graph (Excl)
graph (-graph)

outfile (OutFile)
outfile (-outfile)

auto (String)

psouput (String)