Free snow patrol run software for linux

Snow-Apple provides an icon pack for Gnome.

Mark Finlay fairly converted the nautilus 2.0.x theme called Snow-Apple, to an icon theme for gnome 2.2.x. thanks to him.

wificontrol project is a Kommander script that simply allows you to activate or deactivate the wireless module on your laptop.

Only works if using the acerhk module. Must be run as root (perhaps with kdesu)

imap_tools consists of three programs: imap_search, imap_filter, and imap_rename.

All programs run from your PC against your IMAP server, so there is no need to install any server side software. imap_filter provides a way to write easy filter rules.

delicious python lets you access the Web service of del.icio.us via its API through Python. It uses only the standard Python library an is written in same language.

Installation instructions:
download and unzip
run as root from unzipped directory
python setup.py install
run python and load library with
import pydelicious

Bio::Tools::Run::TribeMCL is a method for clustering proteins into related groups, which are termed protein families.
SYNOPSIS
use Bio::Tools::Run::TribeMCL;
use Bio::SearchIO;
# 3 methods to input the blast results
# straight forward raw blast output (NCBI or WU-BLAST)
my @params = (inputtype=>blastfile);
# OR
# markov program format
# protein_id1 protein_id2 evalue_magnitude evalue_factor
# for example:
# proteins ENSP00000257547 and ENSP00000261659
# with a blast score evalue of 1e-50
# and proteins O42187 and ENSP00000257547
# with a blast score evalue of 1e-119
# entry would be
my @array = [[qw(ENSP00000257547 ENSP00000261659 1 50)],
[qw(O42187 ENSP00000257547 1 119)]];
my @params = (pairs=>@array,I=>2.0);
# OR
# pass in a searchio object
# slowest of the 3 methods as it does more rigourous parsing
# than required for us here
my $sio = Bio::SearchIO->new(-format=>blast,
-file=>blast.out);
my @params=(inputtype=>searchio,I=>2.0);
# you can specify the path to the executable manually in the following way
my @params=(inputtype=>blastfile,I=>2.0,
mcl=>/home/shawn/software/mcl-02-150/src/shmcl/mcl,
matrix=>/home/shawn/software/mcl-02-150/src/contrib/tribe/tribe-matrix);
my $fact = Bio::Tools::Run::TribeMCL->new(@params);
# OR
$fact->matrix_executable(/home/shawn/software/mcl-02-150/src/contrib/tribe/tribe-matrix);
$fact->mcl_executable(/home/shawn/software/mcl-02-150/src/shmcl/mcl);
# to run
my $fact = Bio::Tools::Run::TribeMCL->new(@params);
# Run the program
# returns an array reference to clusters where members are the ids
# for example :2 clusters with 3 members per cluster:
# $fam = [ [mem1 mem2 mem3],[mem1 mem2 mem3]]
# pass in either the blastfile path/searchio obj/the array ref to scores
my $fam = $fact->run($sio);
# print out your clusters
for (my $i = 0; $i
print "Cluster $i t ".scalar(@{$fam->[$i]})." membersn";
foreach my $member (@{$fam->[$i]}){
print "t$membern";
}
}
This clustering is achieved by analysing similarity patterns between proteins in a given dataset, and using these patterns to assign proteins into related groups. In many cases, proteins in the same protein family will have similar functional properties.
Enhancements:
- Perl

PTSPACE is a X11 arcade game which allows you to patrol in space.

The real goal of this games is alien abduction except its you abducting the aliens for a change.

To get started try droping aliens into the sun and spacemen into the wormhole. The control key are shown on the info page.

Patrol in Space is a simple space arcade game in which you abduct aliens to free the solar system from alien invaders.

SATAN is a Port Scanner with a Web Interface.

In order get things up and running,

- You need a UNIX system to run SATAN. In order to unpack the SATAN archive,

compress -d<<less