personalized
cb2Bib 1.3.1
The cb2Bib is a tool for rapidly extracting unformatted biblographic references from email alerts. more>>
The cb2Bib reads the clipboard text contents and process it against a set of predefined patterns. If this automatic detection is successful, cb2Bib formats the clipboard data according to the structured BibTeX reference standard.
Otherwise, if no predefined format pattern is found or if detection proves to be difficult, manual data extraction is greatly simplified by cb2Bib. In most cases, such manual data extraction will provide with a new, personalized pattern to be included within the predefined pattern set for future automatic extractions.
Once the bibliographic reference is correctly extracted, it is added to a specified BibTeX database file. Optionally, article PDF files, if available, are renamed to its citeID and moved to a desired directory as a personal article library
Major Features:
- Select the reference to import from the email or web browser: On Unix machines, cb2Bib automatically detects mouse selections and clipboard changes. On Windows machines, copy or Ctrl-C is necessary to activate cb2Bib automatic processing.
- cb2Bib automatic processing: Once text is selected cb2Bib initiates the automatic reference extraction. It uses the predefined patterns from file regexp.txt to attempt automatic extraction. See Configuring Files section for setting the user predefined pattern matching expression file. After a successful detection bibliographic fields appear on the cb2Bib item line edits. Manual editing is possible at this stage.
- cb2Bib manual processing: If no predefined format pattern is found or if detection proves to be difficult, a manual data extraction must be performed. Select individual reference items from the cb2Bib clipboard area. A popup menu will appear after selection is made. Choose the corresponding bibliographic field. See BiBTeX Entry Types available as cb2Bib fields. Selection is post-processed and added to the cb2Bib item line edit. cb2Bib field tags will show on the cb2Bib clipboard area. Once the manual processing is done, cb2Bib clipboard area will contain the matching pattern. The pattern can be further edited and stored to the regexp.txt file using Insert Regular Expression, Alt+I. See the Extracting Data from the Clipboard and The Regular Expression Editor sections.
- Download reference to cb2Bib: The cb2Bib has the built-in functionality to interact with publishers "Download reference to Citation Manager" service. Choose BibTeX format, or any other format that you can translate using External Clipboard Preparsing Command. See Additional, Keyboard Functionality, Alt C. Click "Download" from your browser. When asked "Open with..." select cb2Bib. The cb2Bib will be launched if no running instance is found. If already running, it will place the downloaded reference to the clipboard, and it will start processing. Make sure your running instance is aware of clipboard changes. See Buttons Functionality. For convenience, the shell script c2bimport, and the desktop config file c2bimport.desktop are also provided.
- Adding documents: PDF and other documents can be added to the BibTeX reference by dragging the file icon and dropping it into the cb2Bib's panel. Optionally, document files, are renamed to its citeID and moved to a desired directory as a personal article library (See Configuring Documents section). Linked to a reference documents correspond to the BibTeX tag file. Usual reference manager software will permit to retrieve and visualize these files. Download, copy and/or moving is scheduled and performed once the reference is accepted, e.g., once it is saved by pressing Save Reference button.
- Multiple retrieving from PDF files: Multiple PDF or convertible to text files can be sequentially processed by dragging a set of files into cb2Bib's PDFImport dialog. By starting the processing button, files are sequentially converted to text and send to cb2Bib clipboard panel for reference extraction. See PDF Reference Import for details.
- Journal-Volume-Page Queries: Takes input Journal, Volume, and first page from the corresponding edit lines and attempts to complete the reference. Additionally, queries consider Title, DOI, and an excerpt, which is a simplified clipboard panel contents. See Configuring Network section, the distribution file netqinf.txt, and Release Note cb2Bib 0.3.5 for customization and details.
- BibTeX Editor: cb2Bib includes a practical text editor suitable for corrections and additions. cb2Bib capabilities are readily available within the editor. E.g., the reference is first sent to cb2Bib by selecting it, and later retrieved from cb2Bib to the editor using 'right click' + 'Paste Current BibTeX'. Interconversions Unicode LaTeX, long abbreviated journal name, and adding/renaming PDF files are easily available. BibTeX Editor is also accessible through a shell command line.
- Advanced features, and processing and extraction details are described in the following sections:
- Extracting Data from the Clipboard
- Processing of author's names
- Processing of journal names
- Field Recognition Rules
- The Regular Expression Editor
- Configuration information is described in the following sections:
- Configuration
- Predefined cite ID placeholders
- Utilities and modules are described in the following sections:
- Search BibTeX files for references
- Embedded File Editor
- PDF Reference Import
- The cb2Bib Command Line
- Reading and writing bibliographic metadata
- The cb2Bib Annote
- The cb2Bib Citer
Enhancements:
- Added Check Repeated functionality for current reference
- Fixed parser not processing last field in inverted comma style BibTeX
- Set netqinf.txt to use internal XML parser for PubMed
- Fixed packaging, double copying scripts and initial external tool setting
- Fixed c2bciter script not passing all arguments (Thanks to F. Rusconi)
Requirements:
To compile cb2Bib, the following libraries must be present and accessible:
- Qt 4.4.0 or higher from Trolltech. On a Linux platform with Qt preinstalled, make sure that the devel packages and Qt tools are also present.
- WebKit library (optional) to compile cb2Bib Annote viewer. It is already included in Qt > 4.4.0 library. No special action/flag is needed during compilation.
- X11 header files if compiling on Unix platforms. Concretely, headers X11/Xlib.h and X11/Xatom.h are needed.
- The header files fcntl.h and unistd.h from glibc-devel package are also required. Otherwise compilation will fail with reference list.cpp:227: `close' undeclared.
DNA Counter 1.0.4
www.dnabaser.com This tool will show the proportions between nucleotides in a DNA sequence. You dont need to install it or unpack it. Just download the program and double click to run it. Other software: DNA Baser is an affordable alternative for assembly of DNA sequences and generation of contigs. File formats supported are abi, scf and seq (or FASTA). Chromatograms of the assembled sequences are displayed in a synchronized format with the generated contig. more>>
DNA Counter - www.dnabaser.com
This tool will show the proportions between nucleotides in a DNA sequence.
You dont need to install it or unpack it. Just download the program and double click to run it.
Other software by HeracleSoftware:
DNA Baser is an affordable alternative for assembly of DNA sequences and generation of contigs. File formats supported are abi, scf and seq (or FASTA). Chromatograms of the assembled sequences are displayed in a synchronized format with the generated contig. Ambiguous bases in the contig are highlighted and corrections are suggested by DNABaser based on Quality Values of the trace files. Minimum input from the user required. Editing of ambiguous bases, including insertion and deletion, is possible. The settings of the assembly engine can be adjusted by the user. The user can personalize the appearance of chromatograms, nucleotides, background. The Quality Values of the trace files are displayed above chromatograms, so that the user can easily decide on the corrections in the final contig. Original chromatogram files are automatically trimmed based on Quality Values. The contig is automatically saved in FASTA format, in the same directory with the original trace files. By using a built-up database of primer and vector sequences, that can be edited/upgraded by the user, DNABaser can be set to automatically trim the vector sequence out of the final contig.
The affordable price is another important feature of DNABaser, at only 490 USD per single license; significant discounts are offered for institutions that order several licenses of DNABaser (see our pricing policy on our web pages).
Enhancements:
Version 1.0.3
better speed
System Requirements:CPU: 100MHz, 16MB RAM, Video 800x600, 0.3MB HDD free space<<less
FASTA to multi-FASTA converter 1.3.1
www.DNABaser.com This tool will look for all DNA FASTA files in the specified folder and will merge their content in a single file. The output file is automatically saved on the HDD. Other software: DNA Baser is an affordable alternative for assembly of DNA sequences and generation of contigs. File formats supported are abi, scf and seq (or FASTA). Chromatograms of the assembled sequences are displayed in a synchronized format with the generated contig. more>>
FASTA to multi-FASTA converter - www.DNABaser.com
This tool will look for all DNA FASTA files in the specified folder and will merge the content in a single file. The output file is automatically saved on the HDD in the same folder as the input files.
Other software by HeracleSoftware:
DNA Baser is an affordable alternative for assembly of DNA sequences and generation of contigs. File formats supported are abi, scf and seq (or FASTA). Chromatograms of the assembled sequences are displayed in a synchronized format with the generated contig. Ambiguous bases in the contig are highlighted and corrections are suggested by DNABaser based on Quality Values of the trace files. Minimum input from the user required. Editing of ambiguous bases, including insertion and deletion, is possible. The settings of the assembly engine can be adjusted by the user. The user can personalize the appearance of chromatograms, nucleotides, background. The Quality Values of the trace files are displayed above chromatograms, so that the user can easily decide on the corrections in the final contig. Original chromatogram files are automatically trimmed based on Quality Values. The contig is automatically saved in FASTA format, in the same directory with the original trace files. By using a built-up database of primer and vector sequences, that can be edited/upgraded by the user, DNABaser can be set to automatically trim the vector sequence out of the final contig.
The affordable price is another important feature of DNABaser, at only 490 USD per single license; significant discounts are offered for institutions that order several licenses of DNABaser (see our pricing policy on our web pages).
Enhancements:
Version 1.3
better speed
System Requirements:CPU: 100MHz, 16MB RAM, Video 800x600, 0.3MB HDD free space<<less
Kirocker Music Display 3.4.1
Kirocker Music Display is an Amaork script that makes your Kicker (the KDE main panel) rock with your music. more>>
It is a Kicker applet that displays what you listen to in Amarok
You then always know what you are listening to, and watch its cover: it is always visible on your panel.
It allows you to rate your music with one click: you can quickly change the number of stars of your musics from anywhere on your desktop.
To install:
- Extract the archive
- Open a konsole in the extracted folder (in Konqueror, go to the extracted folder and press F4)
- Run this set of command: ./configure --prefix=$(kde-config --prefix) && make && sudo make install
- It will ask your root password to install the applet on your system
- Right click the Kicker, choose "Add an Applet to the Panel..." (once the panel is unlocked)
- Double-click "Kirocker Music Display"
- Start playing a music: the applet is empty when Amarok is stopped or paused, to not annoy you with useless information when you are working
Also included in the package: the Kicker right translucent white background.
How to make the kicker translucent:
- Your screen resolution need to be 1280*800. If not, you will need some artistic skills and a Gimp experience to modify the given background
- Extract the image "Kicker Right Translucent Background.png" located in the Kirocker Music Display archive
- Open your desktop background image with The Gimp
- Drag and drop "Kicker Right Translucent Background.png" to the Gimp window of your background image
- Save the image and set it as your desktop background image
- Right click the Kicker and choose "Configure the Panel..." (once the panel is unlocked)
- Place the panel on the right (click the button on the right)
- Set the size to "Personalized" and enter "96 pixels"
- In the "Appearance" tab, check "Enable transparency"
- Click "Ok" and youre done: ENJOY!
Enhancements:
- This release fixes an issue with big playlists where Kirocker Music Display would hang up, act badly, or not respond.
- It also solves a long-standing tedious crash.
- Kirocker Music Display should be rock solid now.
k9copy 1.1.2
K9Copy is a small utility which allows the copy of DVD on Linux. more>>
Copy without menus :
In this case, dvdauthor is used to create a new DVD structure. It is possible to choose the order in which the video sequences are played.
Copy with menus :
As dvdauthor does not make it possible to integrate the original menus, K9Copy reproduces the original structure of the DVD. The navigation packs as well as IFO files are modified to point on the compressed MPEG stream.
The creation of personalized menus has not been renewed in version 1.0.0.
Main features:
- The video stream is compressed to make the DVD fit on 4.7 Gb recordable DVD
- DVD Burning
- Creation of ISO images
- Possibility of selecting the audio tracks and subtitles to be copied
- Title preview (video only)
- Possibility of preserving the original menus
Tellmatic 1.0.6
Tellmatic project is a tool to manage and create newsletters for personalized mailing or mass mailing. more>>
SMTP is used for sending the newsletter to your subscribers to make sure you get all error and bounce messages. Bounces can be handled automagically via a small bounce-management module with POP3 access. It also has a small form-editor and statistics. You can import and export your addresses in CSV format.
CookieSwap 0.5.0
CookieSwap provides an extension that enables you to maintain numerous sets or profiles of cookies that you can quickly. more>>
Main features:
- Changing your cookies/identity to web e-mail sites (like Yahoo, Gmail, Hotmail, etc) so that you can quickly look like different users. Nice if you maintain multiple accounts and are tired of logging out and then back in to switch accounts. Also nice if two people are using the same computer and want to switch between accounts quickly.
- Changing your cookies/identity to see how sites like Amazon and Google treat you differently depending on who you are. For example, if Amazon recognizes you as a returning shopper they give you a different looking page (and there were claims that they give you different prices also). Google has begun to use a feature called "Personalized Search", where they modify their search results based on your user identity. There is a question about this when you create your Google account. The results of Google searches are different depending on if Google knows you or not. Use CookieSwap to quickly swap between Google recognizing you and being anonymous. Run the same search and see the differences.
- If you design web sites, you can setup numerous cookie profiles to look like different types of users and swap between those users quickly and easily to test your site in numerous modes (you can hand edit the cookies to have distinct values in each profile using a nice extension like Add & Edit Cookies).
Pod::HtmlEasy 0.091
Pod::HtmlEasy Perl module can generate personalized HTML from PODs. more>>
SYNOPSIS
Simple usage:
my $podhtml = Pod::HtmlEasy- >new() ;
my $html = $podhtml- >pod2html( test.pod ) ;
print "$htmln" ;
Complete usage:
use Pod::HtmlEasy ;
Create the object and set local events subs:
Note that these are all the events, and examples of how to implement
them. All of these events are, of course, already implemented, so if
the actions provided are adequate, no local subs are required.
The actual implementation of on_head1 is somewhat more complex, to
provide for the detection of the module title and insertion of the
uparrow.
my $podhtml = Pod::HtmlEasy- >new (
on_B = > sub {
my ( $this , $txt ) = @_ ;
return "< b >$txt< /b >" ;
} ,
on_C = > sub {
my ( $this , $txt ) = @_ ;
return "< font face=Courier New >$txt< /font >" ;
} ,
on_E = > sub {
my ( $this , $txt ) = @_ ;
$txt =~ s{^&}{}smx;
$txt =~ s{;$}{}smx;
$txt = qq{#$txt} if $txt =~ /^d+$/ ;
return qq{ &$txt;};
} ,
on_F = > sub {
my ( $this , $txt ) = @_ ;
return "< b >< i >$txt< /i >< /b >" ;
} ,
on_I = > sub {
my ( $this , $txt ) = @_ ;
return "< i >$txt< /i >" ;
} ,
on_L = > sub {
my ( $this , $L , $text, $page , $section, $type ) = @_ ;
if ( $type eq pod ) {
$section = defined $section ? "#$section" : ;
$page = unless defined $page;
return "< i >< a href=http://search.cpan.org/perldoc?$page$section >$text< /a >< /i >" ;
}
elsif( $type eq man ) { return "< i >$text< /i >" ;}
elsif( $type eq url ) { return "< a href=$page target=_blank >$text< /a >" ;}
} ,
on_S = > sub {
my ( $this , $txt ) = @_ ;
$txt =~ s/n/ /gs ;
return $txt ;
} ,
on_X = > sub { return ; } ,
on_Z = > sub { return ; } ,
on_back = > sub {
my $this = shift ;
return "< /ul >$NL" ;
} ,
on_begin = > sub {
my $this = shift ;
my ( $txt , $a_name ) = @_ ;
$this- >{IN_BEGIN} = 1;
return ;
} ,
on_error = > sub {
my ( $this , $txt ) = @_ ;
return qq{< !-- POD_ERROR: $txt -- >} ;
} ,
on_end = > sub {
my $this = shift ;
my ( $txt , $a_name ) = @_ ;
delete $this- >{IN_BEGIN};
return ;
} ,
on_for = > sub { return ;} ,
on_head1 = > sub {
my ( $this , $txt , $a_name ) = @_ ;
return qq{< a name=$a_name >< /a >< h1 >$txt< /h1 >$NL$NL} ;
} ,
on_head2 = > sub {
my ( $this , $txt , $a_name ) = @_ ;
return qq{< a name=$a_name >< /a >< h2 >$txt< /h2 >$NL$NL} ;
} ,
on_head3 = > sub {
my ( $this , $txt , $a_name ) = @_ ;
return qq{< a name=$a_name >< /a >< h3 >$txt< /h3 >$NL$NL} ;
} ,
on_head4 = > sub {
my ( $this , $txt , $a_name ) = @_ ;
return qq{< a name=$a_name >< /a >< h4 >$txt< /h4 >$NL$NL} ;
} ,
on_include = > sub {
my ( $this , $file ) = @_ ;
return qq{./$file} ;
} ,
on_item = > sub {
my ( $this , $txt ) = @_ ;
return qq{< li >$txt< /li >$NL} ;
} ,
on_index_node_start = > sub {
my ( $this , $txt , $a_name , $has_children ) = @_ ;
my $ret = qq{< li >< a href=#$a_name >$txt< /a >$NL} ;
$ret .= q{$NL< ul >$NL} if $has_children ;
return $ret ;
} ,
on_index_node_end = > sub {
my $this = shift ;
my ( $txt , $a_name , $has_children ) = @_ ;
my $ret = $has_children ? q{< /ul >} : $EMPTY ;
return $ret ;
} ,
on_over = > sub {
my ( $this , $level ) = @_ ;
return qq{< ul >$NL? ;
} ,
on_textblock = > sub {
my ( $this , $txt ) = @_ ;
return if exists $this- >{IN_BEGIN};
return qq{< p >$txt< /p >$NL} ;
} ,
on_uri = > sub {
my ( $this , $uri ) = @_ ;
return qq{< a href=$uri target=_blank >$uri< /a >{ ;
} ,
on_verbatim = > sub {
my ( $this , $txt ) = @_ ;
$txt =~ s{(A$NL)*(A$NL)z}{}gsmx;
return unless length $txt;
return qq{< pre >$txt< /pre >$NL} ;
} ,
) ;
## Convert to HTML:
my $html = $podhtml- >pod2html(test.pod ,
test.html ,
title = > POD::Test ,
body = > { bgcolor = > #CCCCCC } ,
css = > test.css ,
) ;
qinstall-src 2.0
qinstall-src is a source package collection along with a bash script that helps an administrator to compile a mail server. more>>
qinstall-src is a source package collection along with a bash script that helps an administrator to compile, configure, install and run an e-mail server, based on qmail, together with all the programs required to run properly.
Main features:
- all perl modules required for optimum runtime;
- user administration web interface(qmailadmin);
- console-based user and domain administration (vpopmail, cqadmin);
- a bash script that eases the administration of queue pending messages (qmHandle);
- personalized webmail (SSL/TLS), activated quota, password changer (squirrelmail);
- ESMTP/SMTP, IMAP/POP3 SSL services activated by default (qmail, courier imap);
- e-mail autoresponder (autorespond);
- antivirus and antispam software (clamav, spamassassin);
- email filters (procmail);
- other programs that help running the e-mail server at optimum speed;
qinstall-src is tested on Slackware, Gentoo, Fedora Core, CentOS, openSuSe and Debian.
Enhancements:
- Many packages have been upgraded to the latest version.
- All packages have been ported to Bluewhite64 Linux (64-bit).
ingimp 2.2.17.20070716
ingimp is a version of the GNU Image Manipulation Program that has been instrumented to collect real-time usability data. more>>
All usability data is automatically transmitted to this website for anyone to download and analyze. We also provide our own analyses (see below). ingimp is part of human-computer interaction (HCI) research at the University of Waterloo investigating new forms of sustainable open usability.
Not only do we provide numerical summarizations of overall ingimp usage, we also provide personalized mirrors of your own personal, usage. Each ingimp user has an online persona that grows to reflect how they use ingimp. For example, if you are an artist who makes heavy use of the pencil tool, your persona will be seen clutching a pencil. Just use ingimp as you would the normal version of the GIMP and use the "Website + Stats" button at start-up to view your own persona along with a summary of your own usage of ingimp.
Enhancements:
- This release is up to date with GIMP 2.2.17.
Web-Based Adult Content Server 0.7.0
Web-Based Adult Content Server is a suite of programs which manage photo sets and video clips of an adult nature. more>>
It runs on a home Linux/Unix server and creates a personalized adult Web server in which to store, preuse, and catalogue a personal collection of adult material.
Web-Based Adult Content Server has many features, like model catalogs, attribute-based searching, randomized highlights, new addition lists, and a flexible bookmark mechanism.
Enhancements:
- This release has new features and many bugfixes.
- It includes a new Web-based Model Manager application, locations-based filtering (e.g. Bathroom), and a new connections infrastructure for galleries and ad-hoc collections.
Security Officers Best Friend (SOBF Tool) 1.0b1
Security Officers Best Friend (SOBF Tool) is an Information Security Risk Analysis and Management tool. more>>
The SOBF Tool is currently in development and there are public preview downloads from time to time.
The SOBF tool makes heavy use of the structures and references from the Repository and features a layer with personalized data ontop the theoretical layer provided by the Repository. The SOBF tool links theoretical informations with a concrete inventory to help the security officer in analyzing and managing his or her assets.
With the data and calculations from the SOBF Tool a security officer can generate reports about situations, gaps, protection profiles and the state of an environment.
Graidle 0.4
Graidle (Graph aid), is a project that is proposed to create an application web for the realization of graph. more>>
Graidle Fx proposed like didactic instrument for the visualization of diagrams of function to one variable;
Graidle SQL Friendly assists the creation of a graph starting from one query;
Graidle FrontEnd supplies to the user a graph personalized second every own requirement;
Graidle Class is the class that comes supplied for the development;
The realization of the site is apt to the demonstration of the operation of the same application, that it can be more complete visualizing sources releasable liberations in the appropriate Download section. We will have therefore one dedicated section to every part of the plan: In Function the customer will insert the number of functions to visualize, the interval and the quality of the curve and will come created a diagram to the flight; With the FronEnd they will be able to be inserted until to nine series give to you, choosing of the type, the name, the options like the colors, the title it, maximum and minimal, the lines grid etc... the customer will be able to save the just graphical one and to insert it in situated presentations or web; From SQL is a pure demonstrative and educational section, that it concurs to create given diagram of one query SQL; between the multiple usefullnesses there is that one of being able to visualize in realtime the graph of some give you present in database without or that one of being able to enclose to the tables of resultset a diagram that can clarify the visualization of gives to you; the handbook for who is available also wanted to externally use the class to this situated one;
The Graidle project is realized in PHP with the aid of GD2 library.
Enhancements:
- Introducing of Horizontal Histogram graph type;
- Introducing of Extended Legend for Horizontal Histogram;
- Introducing of new legend management system for a better visualization of all type of strings;
- Introducing of Selection standard CSS color on setValue function;
- New setMultiColor() to visualize different color on same value serie ;
- New setColors() to add one or more colors;
- New Bold Font type ;
- New setFontBD() method;
- Modified carry2file() for select patch and filename;
Audioscrobbler 0.3.8.1
Audioscrobbler is an XMMS/BMP plugin that builds a profile of your musical tastes. more>>
Every person with a plugin has their own page on the site that shows their listening statistics, and the system automatically matches you to people with similar musical tastes, and generates personalised recommendations.
IPFIRE-wall 0.98.4
IPFIRE-wall is an IPv4 Packet Filter with Network Address Translation capabilities. more>>
Enhancements:
Kernel: Added support for version 2.6.20.
- Corrected a little bug that used to send in userspace also the packets pre/post routed although the silent modality had been chosen.
User Interface:
- Added a new submenu, accessed by the combination CTRL-B, which allows the user to easily add an address to block by its name. This menu can show the list of blocked web addresses, and provides an interface to add and remove new entries.
- The TCP flags representation has been changed: instead of the full name SYN, ACK, RST, PSH, URG, FIN, the user interface, for the sake of brevity, will now just print the corresponding initial letters, i.e. S, A, R, P, U, F, respectively. The Urgent flag will be printed in dark red color, from this version on.
- The length of the rule name has been extended to support 24 characters instead of the 19 of the previous versions.
Documentation:
- the web documentation is being updated and corrected. This process will continue after this release. Until now, practically the firts 14 topics of the documentation text (see ipfirewall documentation index) has been updated. The remaining pages, together with the new screenshots, are still being revised. Keep an eye on them to stay up to date and be able to use the software at its maximum capabilities.