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Gizmo Project Linux 0.8.0.13

Gizmo Project Linux 0.8.0.13


An internet telephone as simple as an instant messenger. Freeware for linux more>> Gizmo Project is a free program that uses advanced VoIP technology to allow you to talk with your friends around the world.
Gizmo Project uses your internet connection (broadband or dial-up) to make calls to other computers. With the click of a mouse, you??e connected to friends, family, and colleagues anywhere on earth. It?? just that simple. You talk clearly. For as long as you want. For FREE.
Features:
Free Voicemail
Call Recording
Sound Blasts (sounds played while on the phone)
Instant Messaging
Call Mapping
Call Forwarding
Worldwide Conference Calls
SIP Network Peering
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Download (6.35MB)
Added: 2009-04-03 License: Freeware Price: Free
209 downloads
Titan Attacks! 1.9

Titan Attacks! 1.9


An arcade game where you have to defend the Solar System from Evil Alien Invaders! more>>

Titan Attacks! 1.9 will provide hours of entertainment for everyone. This is designed as an arcade game where you have to defend the Solar System from Evil Alien Invaders!

The Earth is under attack from evil aliens from Titan! Only you can save us all using a hired space ship. Upgrade your ship with bounty money and drive back the Titans across the Solar System, and defeat them on their homeworld.

Titan Attacks has the same easy-to-learn and addictive gameplay of the classic arcade shoot 'em up, but is packed full of extras - new features, new strategies, and stylish neo-retro visuals. Battle swarms of alien fighters, bombers and giant boss motherships, over 5 unique worlds and 100 levels of frantic action! Earn bounty money and upgrade your ship with extra cannon, rockets and lasers!

You can destroy falling wrecks, dodge hurtling asteroids and capture escaping aliens - or blast them from the skies! Win prizes in sharp-shooter challenge stages and compete on the online hiscores table!

Major Features:

  1. 100 levels of frantic shooter action
  2. 5 giant boss motherships
  3. Upgrade your ship with extra cannon, rockets and lasers
  4. Challenge stages with prizes
  5. Online hiscore table

Requirements:

  • Java 2 Standard Edition Runtime Environment
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Added: 2009-03-18 License: Freeware Price: FREE
1 downloads
Scrabble Blast Solver 0.1

Scrabble Blast Solver 0.1


Scrabble Blast Solver application more>>
Scrabble Blast Solver 0.1 offers you a professional and easy-to-use software which is an effective way to find and display words and their score for the popular online Scrabble Blast game. This product will be your good choice.

Enhancements: Only calculates the correct score of words for the first round.

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Added: 2009-01-29 License: GPL Price: FREE
20 downloads
Tiny Marbles 1.0 Final

Tiny Marbles 1.0 Final


Tiny Marbles provides persistence for dynamic objects, through a data model that you can create, modify and extend at runtime. more>>
Tiny Marbles provides persistence for dynamic objects, through a data model that you can create, modify and extend at runtime.

It is useful for developers who need to create rapid prototypes with an unknown model and developers of applications that have inherently dynamic data models. Tiny Marbles project runs under Java 1.5, supports any database that Hibernate supports.

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Download (8.5MB)
Added: 2007-08-16 License: The Apache License 2.0 Price:
801 downloads
ManiacMarble3D 2.0.2

ManiacMarble3D 2.0.2


ManiacMarble3D is the ultimate marble game. more>>
ManiacMarble3D is the ultimate marble game.

ManiacMarble3D is a remake of a well known game concept. The player has to guide a marble from the start to a target point in a 3D environment. The tricky part of the game is the constant fight against the gravity because the marble has to be moved across small platforms in the sky.

The soundtrack was performed by "the famous band Lasch".

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Download (13.9MB)
Added: 2007-08-10 License: Freeware Price:
805 downloads
Bio::AlignIO::bl2seq 1.4

Bio::AlignIO::bl2seq 1.4


Bio::AlignIO::bl2seq is a bl2seq sequence input/output stream. more>>
Bio::AlignIO::bl2seq is a bl2seq sequence input/output stream.

SYNOPSIS

Do not use this module directly. Use it via the Bio::AlignIO class, as in:

use Bio::AlignIO;

$in = Bio::AlignIO->new(-file => "inputfilename" , -format => bl2seq);
$aln = $in->next_aln();

This object can create Bio::SimpleAlign sequence alignment objects (of 2 sequences) from bl2seq BLAST reports.

A nice feature of this module is that- in combination with StandAloneBlast.pm or remote blasting - it can be used to align 2 sequences and make a SimpleAlign object from them which can then be manipulated using any SimpleAlign.pm methods, eg:

#Get 2 sequences
$str = Bio::SeqIO->new(-file=>t/amino.fa , -format => Fasta, );
my $seq3 = $str->next_seq();
my $seq4 = $str->next_seq();

# Run bl2seq on them
$factory = Bio::Tools::StandAloneBlast->new(program => blastp,
outfile => bl2seq.out);
my $bl2seq_report = $factory->bl2seq($seq3, $seq4);

# Use AlignIO.pm to create a SimpleAlign object from the bl2seq report
$str = Bio::AlignIO->new(-file=> bl2seq.out,-format => bl2seq);
$aln = $str->next_aln();

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Download (4.7MB)
Added: 2007-08-10 License: Perl Artistic License Price:
812 downloads
Tilt-n-Roll Demo

Tilt-n-Roll Demo


Tilt-n-Roll is a puzzle game where you must roll your marble through the 3d maze to the exit. more>>
Tilt-n-Roll is a puzzle game where you must roll your marble through the 3d maze to the exit.
This game is an entry into Intels Game Demo 2007 contest. Please take the time to rate my game and help me win a prize!
Tilt the 3d maze and roll your marble to the exit. The final version will fully support laptop SMS / HDAPS sensors to allow players to tilt the laptop to play! (Support is partially there now - Linux users get an SDL patch and Mac users can wrangle with Unimotion).
Main features:
- Multiple powerups, monsters, switches, puzzles, traps...
- Built-in level editor: design and share your mazes with friends!
- Keyboard or mouse control for unsupported laptops
- Plenty of sound effects and catchy music
- Physics calculations are run in a second thread: multicore users should see an increase in both framerate and simulation accuracy
- Runs on Windows, Mac OS or Linux.
- Completely open-source software under the GNU GPL!
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Download (2.3MB)
Added: 2007-07-16 License: GPL (GNU General Public License) Price:
834 downloads
mpiBLAST 1.4.0-pio

mpiBLAST 1.4.0-pio


mpiBLAST is an MPI based parallel implementation of NCBI BLAST. more>>
mpiBLAST is an MPI based parallel implementation of NCBI BLAST. The project consists of a pair of programs that replace formatdb and blastall with versions that execute BLAST jobs in parallel on a cluster of computers with MPI installed. There are two primary advantages to using mpiBLAST versus traditional BLAST.

First, mpiBLAST splits the database across each node in the cluster. Because each nodes segment of the database is smaller it can usually reside in the buffer-cache, yielding a significant speedup due to the elimination of disk I/O. Second, it allows BLAST users to take advantage of efficient, low-cost Beowulf clusters because interprocessor communication demands are low.

mpiBLAST achieves super-linear speedup in situations where the database is too large to fit into RAM, and near linear speedup in other situations. It does not require a dedicated cluster.

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Download (0.33MB)
Added: 2007-06-29 License: GPL (GNU General Public License) Price:
848 downloads
Domino Blast 0.1

Domino Blast 0.1


Domino Blast project is a physics-based driving/demolition game with a childrens toys theme. more>>
Domino Blast project is a physics-based driving/demolition game with a childrens toys theme.

Domino Blast is a hybrid driving and destruction game with a childrens toys theme. Its environments consist of buildings constructed from domino tiles and a player-controllable toy car. The objective of the game is to wreak as much havoc as possible, within a time limit.

Its game-play is simplistic yet satisfying; similar to the satisfaction gained from watching a tumbling Jenga tower, except the objective is to tumble the tower, rather than slowly deconstruct it. As the game progresses, levels become more dense and the buildings that inhabit them become larger and more complex.

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Download (6.0MB)
Added: 2007-06-18 License: Freeware Price:
858 downloads
Dungeon Crawl 0.2.7 (Stone Soup)

Dungeon Crawl 0.2.7 (Stone Soup)


Dungeon Crawl Stone Soup is a fun, free rogue-like game of exploration and treasure-hunting. more>>
Dungeon Crawl Stone Soup is a fun, free rogue-like game of exploration and treasure-hunting in dungeons filled with dangerous and unfriendly monsters in a quest for the mystifyingly fabulous Orb of Zot.

Dungeon Crawl Stone Soup project is a variant of Linleys Dungeon Crawl thats openly developed and invites participation from the Crawl community.

Dungeon Crawl has superb, deep tactical gameplay, innovative magic and religion systems, and a grand variety of monsters to fight. Crawl is also one of the hardest roguelikes to beat. When you finally beat the game and write your victory post on rec.games.roguelike.misc, you know youve achieved something.

You can also play Crawl online on a public telnet server thanks to the good folks at crawl.akrasiac.org. crawl.akrasiac.org allows you to meet other players ghosts, watch other people playing, and, in general, have a blast.
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Download (1.2MB)
Added: 2007-06-13 License: Free To Use But Restricted Price:
533 downloads
Trackballs 1.1.4

Trackballs 1.1.4


Trackballs is a simple game similar to the classic game Marble Madness. more>>
Trackballs is a FREE and simple game similar to the classic game Marble Madness.
By steering a marble through a track filled with vicious hammers, pools of acid, and other obstacles the player collects points.
When the ball reaches the destination, the player continue to the next, more difficult track - unless, of course, time runs out first.
Enhancements:
- This update includes new user contributed material (new songs and maps) as well as a number of new API functions and cleanups to make it easier and more flexible to design new levels.
- The built in map editor has some improvements (a few missing features have been added).
- Event callbacks on arbitrary animated objects and customizable score/time bonuses when killing arbitrary animated objects have been implemented.
- The documentation for the built-in scripting language has been rewritten.
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Download (5.8MB)
Added: 2007-05-25 License: GPL (GNU General Public License) Price:
534 downloads
Pentago 0.1

Pentago 0.1


Pentago project is a two-player abstract strategy game. more>>
Pentago project is a two-player abstract strategy game.

The game is played on a 6x6 board divided into four 3x3 sub-boards. Taking turns, each player places a marble of their color (black or white) onto an unoccupied space on the board, and then rotates one of the sub-boards by 90 degrees either clockwise or counter-clockwise.

A player wins by getting five of their marbles in a vertical, horizontal or diagonal row (either before or after the sub-board rotation in their move). If all 36 spaces on the board are occupied without a row of five being formed then the game is a draw.

The program includes an AI (Artificial Intelligence).

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Download (0.031MB)
Added: 2007-05-08 License: Freeware Price:
550 downloads
Le Petit Poucet 0.1.0

Le Petit Poucet 0.1.0


Le Petit Poucet is free software to display and edit GPS routes and tracks in a 3D scene. more>>
Le Petit Poucet is free software to display and edit GPS routes and tracks in a 3D scene. The aim of Le Petit Poucet is to build the scene around the GPS data and 2D maps or 3D terrain models.
Apart from being techies, we are outdoor sport lovers and want to prepare our outings and show them to our friends and families. We hope you will find Le Petit Poucet useful. The objective statement being laid, here is the reality and roadmap.
Current version is a pre-alpha version numbered 0.0.2, it is dedicated to David Thompson a great explorer of western Canada. He is been surveying the wild land for 28 years and he is the first person to complete a survey of the Columbia River.
Le Petit Poucet is now able to read a lot of GPS file formats and to connect to the GPS receivers thanks to GPSBabel. It is also able to mix coordinate systems in projected or earth centric referentials.
Currently. Le Petit Poucet is called from the terminal, see command line manual or type the -h or --help option to get the command line usage. We hope to provide quickly a graphical user interface. The program has been compiled and run on Linux (Intel) and Mac Os X (v 10.3), it should work on many other platforms as the core libraries (Open Scene Graph, GPSBabel and GDAL) are portable.
Main features:
Main features
- Loading of tracks or routes, independent waypoints and maps or terrain models and display them on a 3D scene.
- Support of many GPS data file formats through GPSBabel or custom parsers.
- Download GPS receiver data via Serial or USB port.
- 3D navigation based on continuous zoom, swivel and pan with excellent real time anti-aliasing.
- Mixing of several coordinate systems (e.g.: geocentric and projected, UTM and Lambert).
- Coordinate system selection from command line.
Tracks
- Tracks are shown as a set of track segments. Track segments are sets of waypoints connected with a line.
- Track segments are not connected but share the same color and input coordinate system.
- Multiple tracks are shown in a viewer, track color is automatically chosen to visually distinguish tracks.
Waypoints
- Waypoints are displayed as a 3D symbol plus a text in case of named waypoint.
- Name text is automatically oriented toward screen and font size is adjusted dynamically too.
- Text color is selected from command line
- Waypoint information (location, elevation and time) is displayed in a head up display (HUD) when mouse flies over the point.
- Waypoint symbol is loaded from file
- Feature points, i.e. point out of a track, are selected. Are shown only the ones that are in the area of the displayed maps and tracks.
Maps
- 2D Maps are displayed in 3D perspective with box subtrat.PC
- Map loading is currently only supported for the Carte Sur Table file format.
- Map elevation in the 3D scene is computed based on the minimum elevation of the loaded tracks to reduce perspective effects.
- For tracks without maps a box is displayed below the track to improve perspective.
- In the current version, loading of 3D terrain model is through Open Scene Graph (OSG). Models must be projected and optimized using OSG utilities like osgdem see Loading Blue Marble.
Enhancements:
- All the features of release 0.0.5 are now accessible from menus and dialog boxes.
- A graphical user interface is used to wrap the main functionality of the track viewer in 3D, such as opening and closing files; focusing and zooming on tracks, waypoints, or segments; and generating terrains from downloaded or local imagery.
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Download (8.8MB)
Added: 2007-04-16 License: GPL (GNU General Public License) Price:
922 downloads
Marble 0.3

Marble 0.3


Marble is an early beta preview of the Marble Widget application which is targeted for KDE 4. more>>
Marble is an early beta preview of the Marble Widget application which is targeted for KDE 4.
You need to install both packages: "marble" and "marble-data" to run Marble.
Marble is a generic geographical map widget that is meant to be used by KDE4 applications. It shows the earth as a sphere but doesnt make use of any hardware acceleration (No OpenGL). So although it might look similar to professional applications like Google Earth or Nasa World Wind its rather meant to be a small light weight multi purpose widget. To improve speed I decided to compile the Kubuntu packages with SSE support (-msse).
Main features:
- Marble uses a minimal free dataset that can be used offline. Currently the total amount of data that is meant to be shipped is about 5 MB.
- Marble doesnt use OpenGL or 3D hardware acceleration. It just uses Arthur as a painting backend. Extending it later on to support OpenGL as well shouldnt be hard however I dont consider that the primary focus. Depending on your hardware and the maps being displayed framerate is approximately 5-20 fps.
- Marble uses vector as well as bitmap data: Currently it uses the very old MWDB II data combined with ETOPO 2, which I will update to current SRTM soon.
- Marble displays the world map as a 3D sphere, because its more fun to use and less subject to distortion (So with regard to that its just like NASA WorldWind, Earth3D and Google Earth)
- Marble should start up almost instantly. Currently it "cold" starts fully within 2-5 seconds. On each subsequent start it takes about one second.
- Uses KML-Import to display places (Google Earths open format to store placemarks)
- Cities Down to 12000 inhabitants that you can click on using the mouse. Highest Mountains of each continent. Automatic Placemark label placement.
- Different Map Themes, Layers
- Dynamic Coordinate Grid
- Measure Tool
- Basic Wikipedia integration
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Download (6.3MB)
Added: 2007-03-26 License: GPL (GNU General Public License) Price:
951 downloads
Bio::Tools::Run::TribeMCL 1.4

Bio::Tools::Run::TribeMCL 1.4


Bio::Tools::Run::TribeMCL is a method for clustering proteins into related groups, which are termed protein families. more>>
Bio::Tools::Run::TribeMCL is a method for clustering proteins into related groups, which are termed protein families.
SYNOPSIS
use Bio::Tools::Run::TribeMCL;
use Bio::SearchIO;
# 3 methods to input the blast results
# straight forward raw blast output (NCBI or WU-BLAST)
my @params = (inputtype=>blastfile);
# OR
# markov program format
# protein_id1 protein_id2 evalue_magnitude evalue_factor
# for example:
# proteins ENSP00000257547 and ENSP00000261659
# with a blast score evalue of 1e-50
# and proteins O42187 and ENSP00000257547
# with a blast score evalue of 1e-119
# entry would be
my @array = [[qw(ENSP00000257547 ENSP00000261659 1 50)],
[qw(O42187 ENSP00000257547 1 119)]];
my @params = (pairs=>@array,I=>2.0);
# OR
# pass in a searchio object
# slowest of the 3 methods as it does more rigourous parsing
# than required for us here
my $sio = Bio::SearchIO->new(-format=>blast,
-file=>blast.out);
my @params=(inputtype=>searchio,I=>2.0);
# you can specify the path to the executable manually in the following way
my @params=(inputtype=>blastfile,I=>2.0,
mcl=>/home/shawn/software/mcl-02-150/src/shmcl/mcl,
matrix=>/home/shawn/software/mcl-02-150/src/contrib/tribe/tribe-matrix);
my $fact = Bio::Tools::Run::TribeMCL->new(@params);
# OR
$fact->matrix_executable(/home/shawn/software/mcl-02-150/src/contrib/tribe/tribe-matrix);
$fact->mcl_executable(/home/shawn/software/mcl-02-150/src/shmcl/mcl);
# to run
my $fact = Bio::Tools::Run::TribeMCL->new(@params);
# Run the program
# returns an array reference to clusters where members are the ids
# for example :2 clusters with 3 members per cluster:
# $fam = [ [mem1 mem2 mem3],[mem1 mem2 mem3]]
# pass in either the blastfile path/searchio obj/the array ref to scores
my $fam = $fact->run($sio);
# print out your clusters
for (my $i = 0; $i
print "Cluster $i t ".scalar(@{$fam->[$i]})." membersn";
foreach my $member (@{$fam->[$i]}){
print "t$membern";
}
}
This clustering is achieved by analysing similarity patterns between proteins in a given dataset, and using these patterns to assign proteins into related groups. In many cases, proteins in the same protein family will have similar functional properties.
Enhancements:
- Perl
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Download (0.81MB)
Added: 2007-02-22 License: Perl Artistic License Price:
975 downloads
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