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SODIUM 1.5.1

SODIUM 1.5.1


SODIUM it arranges ions around biological macromolecules. more>>
This program places the required number of sodium ions around a system of electric charges, e.g., the atoms of a biological macromolecule (protein, DNA, protein/DNA complex).

The ions are placed in the nodes of a cubic grid, in which the electrostatic energy achieves the smallest values. The energy is re-computed after placement of each ion. A simple Coulombic formula is used for the energy:

Energy(R) = Sum(i_atoms,ions) Q_i / |R-R_i|

All the constants are dropped out from this formula, resulting in some weird energy units; that doesnt matter for the purpose of energy comparison. To speed the program up, the atoms of the macromolecule are re-located to the grid nodes, closest to their original locations.

The resulting error is believed to be minor, compared to that resulting from the one-by-one ions placement, or from using the simplified energy function. The coordinates of the placed ions are printed out in the PDB format for further usage.

It is recommended that the placed ions are equilibrated in a separate Monte Carlo or Molecular Dynamics simulation. Trivial modifications to the program should allow the placement of any combination of multivalent ions of different charges.
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Download (0.40MB)
Added: 2005-04-01 License: Free To Use But Restricted Price:
1699 downloads
Weight Loss Recipe Book 3.1

Weight Loss Recipe Book 3.1


Weight Loss Recipe Book is a free, online, community-built recipe book. more>>
Weight Loss Recipe Book is a free, online, community-built recipe book. Weight Loss Recipe Book contains everything you need to allow your web site visitors to submit recipes and everything your administrator needs to administer the recipes.
When a visitor submits a recipe, the recipe is added to a database and awaits approval from the administrator before being added to the public site.
Main features:
- Community built, meaning you just have to approve entries and watch your web site expand!
- Captcha validation to prevent automated entries into the recipe book.
- Complete administrator system - add administrators, recipe categories, manage recipes and more!
- Best of all, Weight Loss Recipe Book is totally free!
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Download (0.061MB)
Added: 2006-05-08 License: Freeware Price:
1267 downloads
phpMyRecipes 1.2.0

phpMyRecipes 1.2.0


phpMyRecipes is a simple application for storing and retrieving recipes. more>>
phpMyRecipes is a simple application for storing and retrieving recipes. phpMyRecipes project uses a web-based interface, for ease of use across any system, and a MySQL database backend for storing the recipes.

In addition, fine-grained security is implemented so that the recipes can be searched and viewed by anyone, but all functions that make changes (adding/editing/deleting) require additional privileges to be granted by the administrator. Privileges for adding things can be granted separate from privileges for deleting things. The administrator can also decide whether or not units or categories are modifiable, on a per-user basis.

Recipes are categorized, and new categories are easy to create. Ingredients are added to the database on-the-fly, as they are used in recipes. Unit types (such as "cup" or "teaspoon") are stored in the database as well, and can be easily added to or modified. Unit "plurals" are also handled correctly when viewing recipes (using "cups" instead of "cup" in the right places).

A robust search feature is included that allows users to search the recipes based on a wide range of criteria, including words found (or not found) in the instructions, the recipe name, category, and ingredients list.

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Download (0.11MB)
Added: 2006-12-30 License: GPL (GNU General Public License) Price:
1029 downloads
Gourmet Recipe Manager 0.13.3

Gourmet Recipe Manager 0.13.3


Gourmet Recipe Manager is a simple but powerful recipe managing application that is intended for the GNOME desktop environment. more>>
Gourmet Recipe Manager is a simple but powerful recipe-managing application. Gourmet is intended for the GNOME desktop environment, but works on any platform that gtk supports, including windows.
Gourmet allows you to collect, search and organize your recipes, and to automatically generate shopping lists from your collection. Take a look at the screenshots for a sense of how this works.
Gourmet Recipe Manager is free software. If you want to contribute to the project and youre a python programmer, please take a look at the source code and start hacking! If you would like to use Gourmet in a language other than English, you can help translate gourmet using the rosetta web-based tool.
Simple Search
Screenshot of Search viewA simple index view allows you to look at all your recipes as a list and quickly search through them by ingredient, title, category, cuisine, rating, or instructions. Searching happens as you type to save you keystrokes, and multiple kinds of searches can easily be combined from this same view (so you can search for salads (category) with walnuts (ingredient) without having to open a separate dialog. You can easily sort recipes by clicking on the column youd like to sort by. Furthermore, for advanced users, you can search using regular expressions.
Recipe Editor
Screenshot of Search viewA recipe card view allows editing and entering individual recipes easily. It also instantly multiplies ingredient amounts if you need to multiply or divide a recipe, and even adjusts units to keep them as readable as possible (so that 2 tbs. x 4 displays as 1/2 cup). Gourmet aims to make entering ingredients as intuitive and painless as possible, while still allowing for powerful features. Major Features:
A keyed ingredient list which allows searches and shopping-list generation to understand synonyms (like aubergine and eggplant) and ignore ingredient descriptions (i.e. to treat "tomatoes, finely chopped" as "tomatoes" for the purpose of searching and generating shopping lists.
An intuitive spreadsheet-like editing interface
An alternative, fast form-like ingredient entering interface (which allows you to easily type ingredient lists without looking at the screen.
Drag-n-drop support for importing ingredient lists from your web browser or other application.
Support for pasting ingredient lists in from your clipboard.
Support for grouping ingredients within a recipe.
Support for calling another recipe as an ingredient.(Note: this allows you to use a recipe as a menu!)
Support for optional ingredients.
In addition to ingredients and instructions, you can enter information about categories, cuisines, and ratings that you can later use to search for recipes. In each case, Gourmet allows you a drop down menu of standard categories and categories youve used in the past, but also allows you to enter any custom categories you like.
You can also add images to your recipe for an attractive display. Thumbnails will be displayed in the recipe index. Currently, only HTML export supports images.
Import and Export
Gourmet includes simple and powerful import and export filters for a number of formats, including the two most common recipe formats on the web (mealmaster and mastercook).
Gourmet can import the following kinds of files:
Mealmaster Files
MasterCook text files
MasterCook XML files
Gourmet XML files
A number of popular recipe websites, such as epicurious and recipezaar
Gourmet also can import ingredient lists from a regular plain text list, which can be imported from a file, pasted from the clipboard or dragged onto the editing view.
Gourmet can export the following kinds of files:
Mealmaster files
Rich Text Format
Plain Text
Recipe Web Pages
Gourmet XML files
On GNU/Linux systems, gourmet can also export PDF or postscript files via its printing interface.
Gourmet aims to import and export as many common formats as possible. If you have a format youd like to import, please submit a feature request, or, if youre a programmer, go ahead and start writing the filter yourself!
Shopping List Manager
Screenshot of Shopping List ViewGourmet allows you to automatically generate shopping list from your recipes. You can easily multiply recipes when you add them to adjust for the number of people youre cooking for. If the units are convertable, different units used in different recipes will be added up correctly on your shoppings list (Gourmet even knows the density of some common foods to allow volume-to-weight conversions!). If Gourmet cant convert your units, the shopping list will simply display both units -- for example, the screenshot shows both tsp. and cloves of garlic, since these units cant be sensibly combined.
If you already have an item that appears on your shopping list, you can drag it into your "pantry" so it wont be included! Items added to your pantry will be remembered in the future (so you dont have to manually remove items like "water" from your shopping list every time a recipe calls for it). However, since the pantry list is shown next to the shopping list, you will always have a list at hand of all the ingredients called for by your recipes. (You can drag an item back from the pantry to the shopping list if youve run out.)
The shopping list is also automatically sorted into categories. Gourmet knows the basic categories of a number of foods (produce, meat, fish), and you can create whatever categories are convenient for your own shopping -- I use it for sorting out the basic sections and aisles of my local grocery store and those items that I get from specialty stores. You can set up shopping categories as you enter recipes, or you can move ingredients around within the shopping list view by drag and dropping or using a popup menu.
Main features:
- Simple searching and sorting
- Easy recipe editing
- Import and export from various formats
- A shopping list creator and organizer
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Download (2.1MB)
Added: 2007-01-04 License: GPL (GNU General Public License) Price:
1027 downloads
Yet Another antiVirus Recipe 1.9.5

Yet Another antiVirus Recipe 1.9.5


Yet Another antiVirus Recipe is a procmail that helps to filter out a lot of the most common e-mail worms. more>>
Yet Another antiVirus Recipe is a procmail that helps to filter out a lot of the most common e-mail worms.
For some of the above (plain iframe, clsid, xml, macro) e-mail is delivered normally but gets a WARNING in subject plus its old subject ($SUB).
Some of the warnings are:
WARNING-XML-CODEBASE-OBJECT-$SUB
WARNING-CLSID-EXTENSION-$SUB
WARNING-IFRAME-$SUB
WARNING-MACRO-$SUB
WARNING-NSCAM-SCORE:$NKNGS-$SUB
Main features:
- :: base64 signatures ::
- Most of these worms are MS-Windows executables and arrive at our e-mail encoded through base64 routines. YAVR uses especially selected signatures to locate these attachments. After that it places them in a directory (/virus/) sorted by name.
-
- :: iframe html exploit ::
- Through IFrame tag a html encoded e-mail can download and execute a file from a remote http site without informing the user.
-
- :: CLSID hidden extensions exploit ::
- Attachments which end with a Class ID (CLSID) file extension do not show the actual file extension saved and viewed with Windows Explorer. This allows dangerous file types to look as though they are actually innocent files, such as JPG or WAV files.
-
- :: xml codebase exploit ::
- Usage of some xml objects allow local files to be automatically executed, regardless of the security settings on the target machine.
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- :: generic executable trap for bat, pif, vbs, vba, scr, lnk, com, exe ::
- The rest of MS-executable files that are not caught from base64 signatures end up in a virus-could-be file.
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- :: generic macro detection for doc,dot,xls,xla files ::
- MS-Word and MS-Excel files that contain macro commands are marked with a warning.
-
- :: generic detection for most of nigeria scam e-mails (most of them) ::
- Nigeria scam e-mail is not a virus but a big spam problem... There are many good filters that use great algorithms for spam. This is just an add-on.
Enhancements:
- new switches for quarantine or not certain e-mailsbased on some ideas by Dan Smart
- YAVRQUARANTEXE if set to ON it sends unknown executables to /virus/virus-could-be as usual if set to OFF it delivers at inbox with a warning (and the X- header ;)
- YAVRQUARANTNIG same for nigeria scam
- YAVRQUARANTPRN same for porn e-mail read instuctions inside nkvir-rc
- X- marks in headers to help your own procmail scripts
- X-YAVR: MS-EXEC (any MS executable that wasnt identified by signatures)
- X-YAVR: NIGERIA (nigeria scam)
- X-YAVR: PORN (porn related)
- X-YAVR: MACRO (containing macro code)
- X-YAVR: XML-CODEBASE
- X-YAVR: IFRAME
- X-YAVR: CLSID-EXTENSION
- X-YAVR: SENDMAIL-EXPLOIT
- some more Worm.Moodown.b aka Netsky.b signatures
- another Mimail.Q
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Download (0.054MB)
Added: 2006-07-07 License: GPL (GNU General Public License) Price:
1204 downloads
Snippets 1.0

Snippets 1.0


Snippets is a CGI script where fortune cookie meets wiki. more>>
Snippets is a CGI script where fortune cookie meets wiki. The project provides:
- A way for people to share quotes, recipes, jokes...
- A private niche where a person can keep track of sites to visit, people to e-mail.
- A tool for administrators to turn a large repository of static content into a manageable amount of dynamic content.
Snippets is designed to be easy to configure and customize.
Snippets is a versatile CGI script that allows administrators to turn a large amount of static content into a small amount of dynamic content, and users to have an editable quote of the day. Its a cross between a fortune cookie program and a wiki. Snippets can be used for much more than memorable quotes, though; Snippets can be used to show people, or remind them of:
- Jokes
- Quotes
- Recipes
- Websites to visit
- Friends to write/e-mail/call
- Long-term to do items
- Places to visit
- Books to read
- Favorite pictures
- Etc.
Go ahead and play around with it; see what it can do.
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Download (0.046MB)
Added: 2007-02-23 License: GPL (GNU General Public License) Price:
973 downloads
Old Tech 0.2

Old Tech 0.2


System Monitor Theme that started out as a High-Tech one, then devolved into this low-tech broken typewriter version. more>>
System Monitor Theme that started out as a High-Tech one, then devolved into this low-tech broken typewriter version.

I love the chaotic nature of it.

This is my 1st theme, please critique!

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Download (0.12MB)
Added: 2006-07-05 License: GPL (GNU General Public License) Price:
1206 downloads
Nameko 20070620 (Low Level Classes)

Nameko 20070620 (Low Level Classes)


Nameko was born as a simple PHP webmail. more>>
Nameko was born as a simple PHP webmail. Now Nameko is much more than this: its a set of classes to manage e-mail with PHP.
The project can retrieve message from a POP3 server, parse e-mails, send email through SMTP server, and so on.
The mail parser was totally rewritten from the original version: now its greatly improved, and it can read every kind of email.
The Nameko webmail has also been totally rewritten: now it has a great interface, fast, powerful, with a lot of advanced tools.
Each component of the webmail is customizable, with a sort of plug-ins system: you can add only the plug-ins for the functions you really need.
The basic version on Nameko is always a one-file script: so simple tu set up!
Enhancements:
- This release include great performance improvements, making parsing also of heavy email (> 50MB) much faster.
- It includes some code cleanup and small bugfixes.
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Download (0.020MB)
Added: 2007-06-22 License: GPL (GNU General Public License) Price:
859 downloads
Linux::CDROM 0.02

Linux::CDROM 0.02


Linux::CDROM cookbook contains common recipes featuring your CDROM drive as its main ingredient. more>>
Linux::CDROM cookbook contains common recipes featuring your CDROM drive as its main ingredient.

Theres a gazillion ways of reading the disc inside your CDROM drive. The most high-level ones would be mounting your CD and using it as a normal directory or - in case of an Audio-CD - using a player to play tracks. This is boring stuff and you dont need Linux::CDROM for any of that.

But when you want to write your own CD-player or -grabber, this is more like it. You can even get at a lower level than that.

PLAYING AUDIO

Linux::CDROM offers a couple of methods dealing with that. For starting playback, you will use either Linux::CDROM::play_ti (ti == track index) or Linux::CDROM::play_msf (msf == minute, second and frame).

All playing operations happen non-blockingly. That means, you start playback and your program does not wait till the playback is done. Instead if will proceed with the next line.

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Download (0.040MB)
Added: 2006-06-22 License: Perl Artistic License Price:
1220 downloads
Jack audio connection kit 0.103.0

Jack audio connection kit 0.103.0


JACK is a low-latency audio server, written for POSIX conformant operating systems such as GNU/Linux and Apples OS X. more>>
JACK is a low-latency audio server, written for POSIX conformant operating systems such as GNU/Linux and Apples OS X.

Jack audio connection kit can connect a number of different applications to an audio device, as well as allowing them to share audio between themselves. Its clients can run in their own processes (ie. as normal applications), or can they can run within the JACK server (ie. as a "plugin").

JACK was designed from the ground up for professional audio work, and its design focuses on two key areas: synchronous execution of all clients, and low latency operation.

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Download (0.66MB)
Added: 2007-03-19 License: GPL (GNU General Public License) Price:
951 downloads
mOEvIEs 1.15-STABLE

mOEvIEs 1.15-STABLE


mOEvIEs is a low-dependency movie database program. more>>
mOEvIEs is a low-dependency movie database program.

mOEvIEs is easy to use, and doesnt require a database server to be installed like most programs do.

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Download (0.045MB)
Added: 2006-11-18 License: GPL (GNU General Public License) Price:
1071 downloads
Kwotes 1.2.1

Kwotes 1.2.1


Kwotes is a chat quote database system with a twist. more>>
Kwotes is a chat quote database system with a twist.

The quotes are publicly moderated, so its up to you to maintain the quality. All quotes are accepted and if their ranking falls too low for too long, they are deleted.

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Download (0.014MB)
Added: 2005-12-22 License: GPL (GNU General Public License) Price:
1401 downloads
Gamma Low 0.1

Gamma Low 0.1


Gamma Low is an open-source, multiplayer strategy game. more>>
Gamma Low is an open-source, multiplayer strategy game where players in two teams fight for the dominance of a cellular system in a real-time, match-based environment.

In each team, one player is elected to be The Mind, the commander. A few other players are chosen to be his tactical helpers, called the Spirits and the other players form the working and attacking force of the team.

Gamma Low project is released under the GPL license.
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Download (0.071MB)
Added: 2007-06-15 License: zlib/libpng License Price:
863 downloads
SugarCRM 4.5.1

SugarCRM 4.5.1


SugarCRM is the premier commercial open source customer relationship management application provider. more>>
SugarCRM project is the premier commercial open source customer relationship management application provider, breaking the rules set by conventional CRM solutions.
The limitations of traditional CRM software can be summarized by the lack of flexibility, high costs, and closed-source structure which is embedded into the traditional product offerings. This has led to a failure rate of over 70% with traditional CRM implementations.
SugarCRM provides a powerful solution built on a pure open source stack, offering functionality constructed by the best open source CRM experts from around the world. The Sugar Suite is SugarCRMs vanguard CRM solution that understands todays business demands.
SugarCRM provides a complete set of solutions to deliver the best CRM solution based on your needs. These include:
Main features:
- Low acquisition cost
- Low total cost of ownership (TCO)
- Fast and easy user adoption
- Flexible solution to blend with current business processes
- Open standards for low cost integration with legacy systems
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Added: 2007-02-25 License: MPL (Mozilla Public License) Price:
619 downloads
Web Filter 0.96

Web Filter 0.96


webfilt is not a spam filter, but provides a generic web-based interface for Bayesian-style UNIX filters that need occasional tr more>>
webfilt is not a spam filter, but provides a generic web-based interface for Bayesian-style UNIX filters that need occasional training and corrections. It has been tested with SpamProbe and SpamBayes, but should work with other command-line filters too.

The webfilt system works with existing UNIX accounts, and consists of three distinct components that operate independently:

Users procmail recipes and cron jobs. The storelast.sh shell script is invoked by a users .procmailrc and simply saves a size-limited copy of each incoming e-mail message. The destination directory is determined by spam-state, done by procmail processing. A cron job periodically cleans old message copies.

webfiltd, daemon. The daemon component is invoked by inetd, and responds to a number of commands that allow a connecting client to authenticate, read files, and execute remote commands. This is all done with the authenticated users permissions. This daemon accepts just localhost connections.

webfilt.cgi, web interface The CGI program creates the web interface. Running with low privileges, it communicates with the webfiltd daemon over a socket to guarantee privilege isolation. The user logs in using their web browser and can then view recent emails and run commands on certain files (to train the filter).

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Download (0.023MB)
Added: 2006-07-11 License: GPL (GNU General Public License) Price:
1200 downloads
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