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Bio::Das::Lite 1.49
Bio::Das::Lite is a Perl extension for the DAS (HTTP+XML) Protocol. more>>
Bio::Das::Lite is a Perl extension for the DAS (HTTP+XML) Protocol.
SYNOPSIS
use Bio::Das::Lite;
my $bdl = Bio::Das::Lite->new_from_registry({category => Chromosome});
my $results = $bdl->features(22);
SUBROUTINES/METHODS
new : Constructor
my $das = Bio::Das::Lite->new(http://das.ensembl.org/das/ensembl1834);
my $das = Bio::Das::Lite->new({
timeout => 60,
dsn => http://user:pass@das.ensembl.org/das/ensembl1834,
http_proxy => http://user:pass@webcache.local.com:3128/,
});
Options can be: dsn (optional scalar or array ref, URLs of DAS services)
timeout (optional int, HTTP fetch timeout in seconds)
http_proxy (optional scalar, web cache or proxy if not set in %ENV)
caching (optional bool, primitive caching on/off)
callback (optional code ref, callback for processed XML blocks)
registry (optional array ref containing DAS registry service URLs
defaults to http://das.sanger.ac.uk/registry/services/das)
proxy_user (optional scalar, username for authenticating forward-proxy)
proxy_pass (optional scalar, password for authenticating forward-proxy)
user_agent (optional scalar, User-Agent HTTP request header value)
new_from_registry : Constructor
Similar to new above but supports capabilities and category
in the given hashref, using them to query the DAS registry and
configuring the DSNs accordingly.
my $das = Bio::Das::Lite->new_from_registry({
capabilities => [features],
category => [Protein Sequence],
});
Options are as above, plus
capability (optional arrayref of capabilities)
category (optional arrayref of categories)
<<lessSYNOPSIS
use Bio::Das::Lite;
my $bdl = Bio::Das::Lite->new_from_registry({category => Chromosome});
my $results = $bdl->features(22);
SUBROUTINES/METHODS
new : Constructor
my $das = Bio::Das::Lite->new(http://das.ensembl.org/das/ensembl1834);
my $das = Bio::Das::Lite->new({
timeout => 60,
dsn => http://user:pass@das.ensembl.org/das/ensembl1834,
http_proxy => http://user:pass@webcache.local.com:3128/,
});
Options can be: dsn (optional scalar or array ref, URLs of DAS services)
timeout (optional int, HTTP fetch timeout in seconds)
http_proxy (optional scalar, web cache or proxy if not set in %ENV)
caching (optional bool, primitive caching on/off)
callback (optional code ref, callback for processed XML blocks)
registry (optional array ref containing DAS registry service URLs
defaults to http://das.sanger.ac.uk/registry/services/das)
proxy_user (optional scalar, username for authenticating forward-proxy)
proxy_pass (optional scalar, password for authenticating forward-proxy)
user_agent (optional scalar, User-Agent HTTP request header value)
new_from_registry : Constructor
Similar to new above but supports capabilities and category
in the given hashref, using them to query the DAS registry and
configuring the DSNs accordingly.
my $das = Bio::Das::Lite->new_from_registry({
capabilities => [features],
category => [Protein Sequence],
});
Options are as above, plus
capability (optional arrayref of capabilities)
category (optional arrayref of categories)
Download (0.032MB)
Added: 2007-03-20 License: Perl Artistic License Price:
949 downloads
Class::Cloneable 0.03
Class::Cloneable is a base class for Cloneable objects. more>>
Class::Cloneable is a base class for Cloneable objects.
SYNOPSIS
package MyObject;
our @ISA = (Class::Cloneable);
# calling clone on an instance of MyObject
# will give you full deep-cloning functionality
This module provides a flexible base class for building objects with cloning capabilities. This module does its best to respect the encapsulation of all other objects, including subclasses of itself. This is intended to be a stricter and more OO-ish option than the more general purpose Clone and Clone::PP modules.
<<lessSYNOPSIS
package MyObject;
our @ISA = (Class::Cloneable);
# calling clone on an instance of MyObject
# will give you full deep-cloning functionality
This module provides a flexible base class for building objects with cloning capabilities. This module does its best to respect the encapsulation of all other objects, including subclasses of itself. This is intended to be a stricter and more OO-ish option than the more general purpose Clone and Clone::PP modules.
Download (0.008MB)
Added: 2006-10-06 License: Perl Artistic License Price:
1114 downloads

Open IT Online 2.5.1
Open IT Online will improve your browsers capability greatly. It is designed as a Firefox addon that allows to open and edit your documents from everywhere! more>> <<less
Added: 2009-07-21 License: MPL Price: FREE
13 downloads
PyORBit 2.14.3
PyORBit is a Python binding for the ORBit2 CORBA ORB. more>>
PyORBit is a Python binding for the ORBit2 CORBA ORB. It was developped to suit the needs of the bonobo bindings in GNOME-Python, but is usable for other purposes as well. PyORBit aims to follow the standard Python language mapping for CORBA.
It can generate stubs at runtime from typelibs, IDL files, or by introspecting remote objects using ORBit2s IModule typelib capabilities.
<<lessIt can generate stubs at runtime from typelibs, IDL files, or by introspecting remote objects using ORBit2s IModule typelib capabilities.
Download (0.38MB)
Added: 2007-05-27 License: LGPL (GNU Lesser General Public License) Price:
881 downloads
libtsmux 0.2.0
libtsmux is a C library for muxing files into the MPEG Transport Stream container format. more>>
libtsmux is a C library for muxing files into the MPEG Transport Stream container format.
The project can be used to quickly add MPEG Transport Stream muxing capabilities to any application or framework. A GStreamer plugin using the library is available.
Enhancements:
- The muxer library was updated to conform to the latest version of Dirac in the MPEG-TS specification.
- Various minor bugs were fixed.
<<lessThe project can be used to quickly add MPEG Transport Stream muxing capabilities to any application or framework. A GStreamer plugin using the library is available.
Enhancements:
- The muxer library was updated to conform to the latest version of Dirac in the MPEG-TS specification.
- Various minor bugs were fixed.
Download (0.22MB)
Added: 2007-02-22 License: MIT/X Consortium License Price:
976 downloads
pmacct-fe 0.1.2
pmacct-fe is a frontend tool for presenting network statistics in tables and plots. more>>
pmacct-fe is a frontend tool for presenting network statistics in tables and plots. pmacct-fe project works by reading aggregates stored into a PostgreSQL database by pmacct.
Features include user authentication and capabilities, support for multiple observation points and customizable report types.
<<lessFeatures include user authentication and capabilities, support for multiple observation points and customizable report types.
Download (0.057MB)
Added: 2005-12-22 License: GPL (GNU General Public License) Price:
1402 downloads
phpLinks 2.1.3.1
phpLinks project is a free and Open Source PHP script that allows you to run a very powerful link farm. more>>
phpLinks project is a free and Open Source PHP script that allows you to run a very powerful link farm.
phpLinks is a free and Open Source PHP script that allows you to run a very powerful link farm or search engine simulation.
Features: full search capabilities, recursive multilevel site categorization, full referrer tracking, site reviews, site ratings, link validation, related categories, category searching, and search term tracking.
<<lessphpLinks is a free and Open Source PHP script that allows you to run a very powerful link farm or search engine simulation.
Features: full search capabilities, recursive multilevel site categorization, full referrer tracking, site reviews, site ratings, link validation, related categories, category searching, and search term tracking.
Download (0.12MB)
Added: 2007-04-26 License: GPL (GNU General Public License) Price:
912 downloads
Task Database 1.0
Task Database brings users the convenience of an Adobe AIR application that effectively demonstrates Flex database capabilities. SQL database is created on your desktop. more>>
Task Database 1.0 brings users the convenience of an Adobe AIR application that effectively demonstrates Flex database capabilities. SQL database is created on your desktop.
Adobe Air is a Cross-operating system runtime that lets developers combine HTML, AJAX, Adobe Flash, and Flex technologies to deploy rich Internet applications on the desktop.
Companies like eBay, AOL, and NASDAQ are already using Adobe AIR to deliver engaging RIAs to their users' desktops. To run applications, you will need to first download and install Adobe Air on your computer.
<<less Added: 2009-07-27 License: Freeware Price: FREE
downloads
ChomboVis 4.16.11
ChomboVis is a program for visualization of 2D and 3D AMR data sets. more>>
ChomboVis is a program for visualization of 3D and 2D AMR data sets.
ChomboVis is provided as a full open-source distribution and may be modified and redistributed for non-commercial uses, provided the copyright notice is left in place in the source code.
We encourage contributions and extensions from the scientific community and will endeavor to extend the tools capabilities ourselves into the future.
ChomboVis was a joint effort of the Applied Numerical Algorithms Group and of the Visualization Group at LBNL.
<<lessChomboVis is provided as a full open-source distribution and may be modified and redistributed for non-commercial uses, provided the copyright notice is left in place in the source code.
We encourage contributions and extensions from the scientific community and will endeavor to extend the tools capabilities ourselves into the future.
ChomboVis was a joint effort of the Applied Numerical Algorithms Group and of the Visualization Group at LBNL.
Download (MB)
Added: 2007-06-02 License: BSD License Price:
526 downloads
TextCite 0.6 Beta
TextCite is a program for organizing and commenting textual citations from texts. more>>
TextCite is a program for organizing and commenting textual citations from texts (books, articles, or other published works) for use in producing scientific or academic publications. You can organize by publication, author, category, or outline.
It works with bibliographic management programs like Citation, EndNote, RefWorks, and BibTeX, providing important text/citation management capabilities that these programs lack, while still allowing for rapid footnote and bibliography generation by means of your favorite bibliography manager. The project also exports to PDF and Word (RTF).
<<lessIt works with bibliographic management programs like Citation, EndNote, RefWorks, and BibTeX, providing important text/citation management capabilities that these programs lack, while still allowing for rapid footnote and bibliography generation by means of your favorite bibliography manager. The project also exports to PDF and Word (RTF).
Download (5.4MB)
Added: 2007-08-22 License: GPL (GNU General Public License) Price:
793 downloads
Mobile::Wurfl 1.06
Mobile::Wurfl is a Perl module interface to WURFL (the Wireless Universal Resource File. more>>
Mobile::Wurfl is a Perl module interface to WURFL (the Wireless Universal Resource File.
SYNOPSIS
my $wurfl = Mobile::Wurfl->new(
wurfl_home => "/path/to/wurfl/home",
db_descriptor => "DBI:mysql:database=wurfl:host=localhost",
db_username => wurfl,
db_password => wurfl,
wurfl_url => q{http://wurfl.sourceforge.net/wurfl.xml}
);
my $dbh = DBI->connect( $db_descriptor, $db_username, $db_password );
my $wurfl = Mobile::Wurfl->new( dbh => $dbh );
my $desc = $wurfl->get( db_descriptor );
$wurfl->set( wurfl_home => "/another/path" );
$wurfl->create_tables( $sql );
$wurfl->update();
$wurfl->get_wurfl();
$wurfl->rebuild_tables();
my @devices = $wurfl->devices();
for my $device ( @devices )
{
print "$device->{user_agent} : $device->{id}n";
}
my @groups = $wurfl->groups();
my @capabilities = $wurfl->capabilities();
for my $group ( @groups )
{
@capabilities = $wurfl->capabilities( $group );
}
my $ua = $wurfl->canonical_ua( "SonyEricssonK750i/R1J Browser/SEMC-Browser/4.2 Profile/MIDP-2.0 Configuration/CLDC-1.1" );
my $deviceid = $wurfl->deviceid( $ua );
my $wml_1_3 = $wurfl->lookup( $ua, "wml_1_3" );
print "$wml_1_3->{name} = $wml_1_3->{value} : in $wml_1_3->{group}n";
my $fell_back_to = wml_1_3->{deviceid};
my $width = $wurfl->lookup_value( $ua, "max_image_height", no_fall_back => 1 );
$wurfl->cleanup();
Mobile::Wurfl is a perl module that provides an interface to mobile device information represented in wurfl (http://wurfl.sourceforge.net/). The Mobile::Wurfl module works by saving this device information in a database (preferably mysql).
It offers an interface to create the relevant database tables from a SQL file containing "CREATE TABLE" statements (a sample is provided with the distribution). It also provides a method for updating the data in the database from the wurfl.xml file hosted at http://www.nusho.it/wurfl/dl.php?t=d&f=wurfl.xml.
It provides methods to query the database for lists of capabilities, and groups of capabilities. It also provides a method for generating a "canonical" user agent string (see "canonical_ua").
Finally, it provides a method for looking up values for particular capability / user agent combinations. By default, this makes use of the hierarchical "fallback" structure of wurfl to lookup capabilities fallback devices if these capabilities are not defined for the requested device.
<<lessSYNOPSIS
my $wurfl = Mobile::Wurfl->new(
wurfl_home => "/path/to/wurfl/home",
db_descriptor => "DBI:mysql:database=wurfl:host=localhost",
db_username => wurfl,
db_password => wurfl,
wurfl_url => q{http://wurfl.sourceforge.net/wurfl.xml}
);
my $dbh = DBI->connect( $db_descriptor, $db_username, $db_password );
my $wurfl = Mobile::Wurfl->new( dbh => $dbh );
my $desc = $wurfl->get( db_descriptor );
$wurfl->set( wurfl_home => "/another/path" );
$wurfl->create_tables( $sql );
$wurfl->update();
$wurfl->get_wurfl();
$wurfl->rebuild_tables();
my @devices = $wurfl->devices();
for my $device ( @devices )
{
print "$device->{user_agent} : $device->{id}n";
}
my @groups = $wurfl->groups();
my @capabilities = $wurfl->capabilities();
for my $group ( @groups )
{
@capabilities = $wurfl->capabilities( $group );
}
my $ua = $wurfl->canonical_ua( "SonyEricssonK750i/R1J Browser/SEMC-Browser/4.2 Profile/MIDP-2.0 Configuration/CLDC-1.1" );
my $deviceid = $wurfl->deviceid( $ua );
my $wml_1_3 = $wurfl->lookup( $ua, "wml_1_3" );
print "$wml_1_3->{name} = $wml_1_3->{value} : in $wml_1_3->{group}n";
my $fell_back_to = wml_1_3->{deviceid};
my $width = $wurfl->lookup_value( $ua, "max_image_height", no_fall_back => 1 );
$wurfl->cleanup();
Mobile::Wurfl is a perl module that provides an interface to mobile device information represented in wurfl (http://wurfl.sourceforge.net/). The Mobile::Wurfl module works by saving this device information in a database (preferably mysql).
It offers an interface to create the relevant database tables from a SQL file containing "CREATE TABLE" statements (a sample is provided with the distribution). It also provides a method for updating the data in the database from the wurfl.xml file hosted at http://www.nusho.it/wurfl/dl.php?t=d&f=wurfl.xml.
It provides methods to query the database for lists of capabilities, and groups of capabilities. It also provides a method for generating a "canonical" user agent string (see "canonical_ua").
Finally, it provides a method for looking up values for particular capability / user agent combinations. By default, this makes use of the hierarchical "fallback" structure of wurfl to lookup capabilities fallback devices if these capabilities are not defined for the requested device.
Download (0.10MB)
Added: 2007-03-22 License: Perl Artistic License Price:
953 downloads
tiffscan 0.2
tiffscan is an advanced SANE frontend. more>>
tiffscan is an advanced SANE frontend. It has batch mode capabilities and can generate compressed multi-page TIFF files. The project handles from black and white to 8-bit and 16-bit scans.
<<less Download (0.012MB)
Added: 2007-01-26 License: GPL (GNU General Public License) Price:
1001 downloads
g-page 2.03
g-page is a client/server application designed to send text messages to pagers or SMS enabled PCS phones. more>>
g-page is a client/server application for Unix designed to send text messages to alphanumeric pagers or PCS phones with short messaging, SMS, capabilities.
It supports the SNPP, WCTP, and SMTP (email) protocols, and works on a stand-alone workstation or across a network.
<<lessIt supports the SNPP, WCTP, and SMTP (email) protocols, and works on a stand-alone workstation or across a network.
Download (0.20MB)
Added: 2006-09-06 License: GPL (GNU General Public License) Price:
1146 downloads
LibHTTPD 1.4
LibHTTPD can be used to add basic Web server capabilities to an application or embedded device. more>>
LibHTTPD can be used to add basic web server capabilities to an application or embedded device.
The library handles both static and dynamically generated content, has very low overheads, and provides many features to simplify the creation of web based application interfaces.
<<lessThe library handles both static and dynamically generated content, has very low overheads, and provides many features to simplify the creation of web based application interfaces.
Download (0.16MB)
Added: 2005-09-15 License: GPL (GNU General Public License) Price:
1499 downloads
bcr beats 0.1
bcr steps is a step sequencer and arpeggiator made for the Behringer BCR2000 controller. more>>
bcr steps is a step sequencer and arpeggiator made for the Behringer BCR2000 controller. This project can also be used on its own, or with almost any other MIDI controller.
If you like, you can try out the applet version, though it wont give you the full MIDI capabilities of the standalone application.
<<lessIf you like, you can try out the applet version, though it wont give you the full MIDI capabilities of the standalone application.
Download (0.10MB)
Added: 2007-06-12 License: GPL (GNU General Public License) Price:
866 downloads
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