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B::Assembler 5.8.8
B::Assembler is a Perl module created to assemble Perl bytecode. more>>
B::Assembler is a Perl module created to assemble Perl bytecode.
SYNOPSIS
use B::Assembler qw(newasm endasm assemble);
newasm(&printsub); # sets up for assembly
assemble($buf); # assembles one line
endasm(); # closes down
use B::Assembler qw(assemble_fh);
assemble_fh($fh, &printsub); # assemble everything in $fh
<<lessSYNOPSIS
use B::Assembler qw(newasm endasm assemble);
newasm(&printsub); # sets up for assembly
assemble($buf); # assembles one line
endasm(); # closes down
use B::Assembler qw(assemble_fh);
assemble_fh($fh, &printsub); # assemble everything in $fh
Download (12.2MB)
Added: 2007-06-25 License: GPL (GNU General Public License) Price:
851 downloads
P65 Assembler 0.7.2
P65 Assembler is a Portable 6502 cross-assembler. more>>
The P65 assemblers are assemblers for the 6502 microprocessor (such as is used in the Commodore 64, Apple II, and Nintendo Entertainment System).
They are designed to be able to support a wide variety of output formats, both to support multiple target platforms and to produce code for emulators.
The eventual goal of P65 is to be as expressive as the more powerful assemblers of the late 80s, such as DASM. Its not there yet, but its getting there.
Main features:
- Highly portable - All versions of P65 are written in portable scripting languages. The original releases were done in Perl. While P65-Perl 1.1 is stable and reasonably powerful, it lacks some major features, such as modules and macros. P65-Ophis, the Python port, will run on slightly fewer architectures, but will still run on all current major systems.
- Flexible output format - P65 allows for very flexible control over data and assemble points. Output file formats are completely independent of the final memory maps.
- Multiple file support - libraries may be kept as seperate files and included seperately, facilitating code reuse.
- Temporary label support - source may contain "anonymous labels" that help decrease namespace pollution. P65-Ophis also supports named temporary labels that only exist within a well-defined scope.
- Assemble-time expressions - P65-Ophis supports High-byte/low-byte computations along with bitmasking and traditional arithmetic operations in code and data statements. Access to the current PC is also supported. P65-Perls expressions are more limited but are generally sufficient.
- Symbol table management - Allows for creating labels and data constants outside of the code, and for allocating RAM symbolically. This includes full support for segments.
- Optimal instruction selection - Compresses as many instructions as possible into zero page format. If this compression permits other instructions to become zero page instructions, it will compress those as well.
<<lessThey are designed to be able to support a wide variety of output formats, both to support multiple target platforms and to produce code for emulators.
The eventual goal of P65 is to be as expressive as the more powerful assemblers of the late 80s, such as DASM. Its not there yet, but its getting there.
Main features:
- Highly portable - All versions of P65 are written in portable scripting languages. The original releases were done in Perl. While P65-Perl 1.1 is stable and reasonably powerful, it lacks some major features, such as modules and macros. P65-Ophis, the Python port, will run on slightly fewer architectures, but will still run on all current major systems.
- Flexible output format - P65 allows for very flexible control over data and assemble points. Output file formats are completely independent of the final memory maps.
- Multiple file support - libraries may be kept as seperate files and included seperately, facilitating code reuse.
- Temporary label support - source may contain "anonymous labels" that help decrease namespace pollution. P65-Ophis also supports named temporary labels that only exist within a well-defined scope.
- Assemble-time expressions - P65-Ophis supports High-byte/low-byte computations along with bitmasking and traditional arithmetic operations in code and data statements. Access to the current PC is also supported. P65-Perls expressions are more limited but are generally sufficient.
- Symbol table management - Allows for creating labels and data constants outside of the code, and for allocating RAM symbolically. This includes full support for segments.
- Optimal instruction selection - Compresses as many instructions as possible into zero page format. If this compression permits other instructions to become zero page instructions, it will compress those as well.
Download (0.02MB)
Added: 2005-04-22 License: BSD License Price:
926 downloads
Regexp::Assemble 0.28
Regexp::Assemble is Perl module to assemble multiple Regular Expressions into a single RE. more>>
Regexp::Assemble is Perl module to assemble multiple Regular Expressions into a single RE.
SYNOPSIS
use Regexp::Assemble;
my $ra = Regexp::Assemble->new;
$ra->add( ab+c );
$ra->add( ab+- );
$ra->add( awd+ );
$ra->add( ad+ );
print $ra->re; # prints a(?:w?d+|b+[-c])
Regexp::Assemble takes an arbitrary number of regular expressions and assembles them into a single regular expression (or RE) that matches all that the individual REs match.
As a result, instead of having a large list of expressions to loop over, a target string only needs to be tested against one expression. This is interesting when you have several thousand patterns to deal with. Serious effort is made to produce the smallest pattern possible.
It is also possible to track the original patterns, so that you can determine which, among the source patterns that form the assembled pattern, was the one that caused the match to occur.
You should realise that large numbers of alternations are processed in perls regular expression engine in O(n) time, not O(1). If you are still having performance problems, you should look at using a trie. Note that Perls own regular expression engine will implement trie optimisations in perl 5.10 (they are already available in perl 5.9.3 if you want to try them out). Regexp::Assemble will do the right thing when it knows its running on a a tried perl. (At least in some version after this one).
<<lessSYNOPSIS
use Regexp::Assemble;
my $ra = Regexp::Assemble->new;
$ra->add( ab+c );
$ra->add( ab+- );
$ra->add( awd+ );
$ra->add( ad+ );
print $ra->re; # prints a(?:w?d+|b+[-c])
Regexp::Assemble takes an arbitrary number of regular expressions and assembles them into a single regular expression (or RE) that matches all that the individual REs match.
As a result, instead of having a large list of expressions to loop over, a target string only needs to be tested against one expression. This is interesting when you have several thousand patterns to deal with. Serious effort is made to produce the smallest pattern possible.
It is also possible to track the original patterns, so that you can determine which, among the source patterns that form the assembled pattern, was the one that caused the match to occur.
You should realise that large numbers of alternations are processed in perls regular expression engine in O(n) time, not O(1). If you are still having performance problems, you should look at using a trie. Note that Perls own regular expression engine will implement trie optimisations in perl 5.10 (they are already available in perl 5.9.3 if you want to try them out). Regexp::Assemble will do the right thing when it knows its running on a a tried perl. (At least in some version after this one).
Download (0.080MB)
Added: 2007-04-03 License: Perl Artistic License Price:
935 downloads
Flat Assembler 1.67.21
Flat Assembler is an extremely fast and efficient x86 assembler. more>>
The flat assembler is a fast and efficient self-assembling 80x86 assembler for DOS, Windows, and Linux operating systems. Currently, it supports all 8086-80486/Pentium instructions with MMX, SSE, SSE2, SSE3, and 3DNow! extensions.
It can produce output in binary, MZ, PE, COFF, or ELF format. Flat Assembler includes the powerful but easy-to-use macroinstruction support, and does multiple passes to optimize the instruction codes for size. The flat assembler is entirely written in assembly language.
Enhancements:
- 32-bit relocations are now allowed in PE64 output format.
- EIP-relative addressing was added.
- The PLT operator was added for the ELF output format.
- SSSE3 (Supplemental SSE3) instructions were added.
- Some Win64 headers and examples were provided in the Windows package.
- The SYSRETQ mnemonic was added, and RDMSRQ/WRMSRQ/SYSEXITQ mnemonics were added for the 64-bit variants of respective instructions.
- R8L-R15L (Intel-style) aliases were added for R8B-R15B registers. Support for the AMD SVM technology instructions was added. Numerous bugs were fixed.
<<lessIt can produce output in binary, MZ, PE, COFF, or ELF format. Flat Assembler includes the powerful but easy-to-use macroinstruction support, and does multiple passes to optimize the instruction codes for size. The flat assembler is entirely written in assembly language.
Enhancements:
- 32-bit relocations are now allowed in PE64 output format.
- EIP-relative addressing was added.
- The PLT operator was added for the ELF output format.
- SSSE3 (Supplemental SSE3) instructions were added.
- Some Win64 headers and examples were provided in the Windows package.
- The SYSRETQ mnemonic was added, and RDMSRQ/WRMSRQ/SYSEXITQ mnemonics were added for the 64-bit variants of respective instructions.
- R8L-R15L (Intel-style) aliases were added for R8B-R15B registers. Support for the AMD SVM technology instructions was added. Numerous bugs were fixed.
Download (0.17MB)
Added: 2007-03-20 License: BSD License Price:
958 downloads
Jetspeed 2.0
Jetspeed provides a JSR-168 compliant enterprise portal. more>>
Jetspeed provides a JSR-168 compliant enterprise portal.
etspeed-2 is a full implementation of the Java Portlet API. It is fully compliant with the Portlet Specification 1.0 (JSR-168). It has passed the TCK (Test Compatibility Kit) suite and is fully CERTIFIED to the Java Portlet Standard.
Notable features include security components backed by LDAP and database implementations, and some robust administration interfaces. Custom portals can be built and deployed using the Jetspeed plugin for Maven.
Developers can use the Jetspeed PSML language to assemble portlets, and the Apache Portals Bridges project to bridge portals with existing technologies including Struts, JSF, PHP, and Perl.
For GUI designers, Jetspeed comes with several built-in templates used to decorate portals and portlets.
Main features:
- Fully compliant with Java Portlet API Standard 1.0 (JSR 168)
- Passed JSR-168 TCK Compatibility Test Suite
- J2EE Security based on JAAS Standard, JAAS DB Portal Security Policy
- LDAP Support for User Authentication
- Spring-based Components and Scalable Architecture
- Configurable Pipeline Request Processor
- Auto Deployment of Portlet Applications
- Jetspeed Component Java API
- Jetspeed AJAX XML API
- Declarative Security Constraints and JAAS Database Security Policy
- Runtime Portlet API Standard Role-based Security
- Portal Content Management and Navigations: Pages, Menus, Folders, Links
- Multithreaded Aggregation Engine
- PSML Folder CMS Navigations, Menus, Links
- Jetspeed SSO (Single Sign-on)
- Rules-based Profiler for page and resource location
- Integrates with most popular databases including Derby, MySQL, MS SQL, Postgres, Oracle, DB2, Hypersonic
- Client independent capability engine (html, xhtml, wml,vml)
- Internationalization: Localized Portal Resources in 12 Languages
- Statistics Logging Engine
- Portlet Registry
- Full Text Search of Portlet Resources with Lucene
- User Registration
- Forgotten Password
- Rich Login and Password Configuration Management
<<lessetspeed-2 is a full implementation of the Java Portlet API. It is fully compliant with the Portlet Specification 1.0 (JSR-168). It has passed the TCK (Test Compatibility Kit) suite and is fully CERTIFIED to the Java Portlet Standard.
Notable features include security components backed by LDAP and database implementations, and some robust administration interfaces. Custom portals can be built and deployed using the Jetspeed plugin for Maven.
Developers can use the Jetspeed PSML language to assemble portlets, and the Apache Portals Bridges project to bridge portals with existing technologies including Struts, JSF, PHP, and Perl.
For GUI designers, Jetspeed comes with several built-in templates used to decorate portals and portlets.
Main features:
- Fully compliant with Java Portlet API Standard 1.0 (JSR 168)
- Passed JSR-168 TCK Compatibility Test Suite
- J2EE Security based on JAAS Standard, JAAS DB Portal Security Policy
- LDAP Support for User Authentication
- Spring-based Components and Scalable Architecture
- Configurable Pipeline Request Processor
- Auto Deployment of Portlet Applications
- Jetspeed Component Java API
- Jetspeed AJAX XML API
- Declarative Security Constraints and JAAS Database Security Policy
- Runtime Portlet API Standard Role-based Security
- Portal Content Management and Navigations: Pages, Menus, Folders, Links
- Multithreaded Aggregation Engine
- PSML Folder CMS Navigations, Menus, Links
- Jetspeed SSO (Single Sign-on)
- Rules-based Profiler for page and resource location
- Integrates with most popular databases including Derby, MySQL, MS SQL, Postgres, Oracle, DB2, Hypersonic
- Client independent capability engine (html, xhtml, wml,vml)
- Internationalization: Localized Portal Resources in 12 Languages
- Statistics Logging Engine
- Portlet Registry
- Full Text Search of Portlet Resources with Lucene
- User Registration
- Forgotten Password
- Rich Login and Password Configuration Management
Download (66.5MB)
Added: 2007-02-06 License: The Apache License Price:
991 downloads
Kubuntu Human Theme 0.9
Kubuntu Human Theme was created because I started to like the Ubuntu Human theme and when I switched to KDE, I was missing it. more>>
Kubuntu Human Theme was created because I started to like the Ubuntu Human theme and when I switched to KDE, I was missing it there. The theme is assembled from various Ubuntu style items, most of which can be found on KDE-look: Ubuntu Cristal background, Human (Revised) color scheme, nuoveXT icons, Ubuntu Kmenu icon, SoftGlow Orange kicker, default Plastik style and Crystal window deco.
Installation of .kth file thru KDE Control Center--Theme Manager--Install; then, if you want exactly the same look, get and install the above items (search on KDE-look). The Kmenu can be changed by replacing each kmenu.png in /usr/share/icons/nuovext/[SIZE]/apps/ Then refresh your icon set.
<<lessInstallation of .kth file thru KDE Control Center--Theme Manager--Install; then, if you want exactly the same look, get and install the above items (search on KDE-look). The Kmenu can be changed by replacing each kmenu.png in /usr/share/icons/nuovext/[SIZE]/apps/ Then refresh your icon set.
Download (MB)
Added: 2007-04-16 License: GPL (GNU General Public License) Price:
946 downloads
Be::Attribute 0.1
Be::Attribute is a Perl module to get and set MIME file attributes. more>>
Be::Attribute is a Perl module to get and set MIME file attributes.
SYNOPSIS
use Be::Attribute;
$node = Be::Attribute::GetBNode("/my/file/here");
@attrs = Be::Attribute::ListAttrs($node);
for $i (@attrs) {
print "$i - ", Be::Attribute::ReadAttr($node, $i), "n";
}
Be::Attribute::CloseNode($node);
Get (or set) MIME file attributes.
USAGE
lookit the synopsis. look at example.pl. Look at the .xs code. Read the Node webpage.
<<lessSYNOPSIS
use Be::Attribute;
$node = Be::Attribute::GetBNode("/my/file/here");
@attrs = Be::Attribute::ListAttrs($node);
for $i (@attrs) {
print "$i - ", Be::Attribute::ReadAttr($node, $i), "n";
}
Be::Attribute::CloseNode($node);
Get (or set) MIME file attributes.
USAGE
lookit the synopsis. look at example.pl. Look at the .xs code. Read the Node webpage.
Download (0.003MB)
Added: 2007-04-12 License: Perl Artistic License Price:
925 downloads
Adobe Source Libraries 1.0.29
The Adobe Source Libraries (ASL) are a collection of C++ libraries to allow the construction of commercial application. more>>
The Adobe Source Libraries (ASL) are a collection of C++ libraries building foundation technology to allow the construction of commercial applications by assembling generic algorithms through declarative descriptions.
Enhancements:
- GIL version 2.1 (support for sub-byte aligned pixel values in images).
- An ASL version_0 namespace has been introduced to maintain binary compatibility going forward.
- There are poly< > library improvements. adobe/vector.hpp and adobe/closed_hash.hpp have been added as generic containers.
- There are many other improvements.
<<lessEnhancements:
- GIL version 2.1 (support for sub-byte aligned pixel values in images).
- An ASL version_0 namespace has been introduced to maintain binary compatibility going forward.
- There are poly< > library improvements. adobe/vector.hpp and adobe/closed_hash.hpp have been added as generic containers.
- There are many other improvements.
Download (8.2MB)
Added: 2007-07-16 License: MIT/X Consortium License Price:
831 downloads
Content Feeder 2.0
Content Feeder is a library used for assembling content feeds. more>>
ContentFeeder - A library used for assembling content feeds. RSS 2.0 is currently the only format supported, but can easily be extended to handle more.
ContentFeeder_RSS2 is the class name to instantiate to create RSS 2.0 feeds.
Example:
require(ContentFeeder.class.php);
$rss =& new ContentFeeder_RSS2;
Enhancements:
- change default character set to UTF-8
- change default escapement to none
- add escape type of none
- add setDefaultEscapeType()
<<lessContentFeeder_RSS2 is the class name to instantiate to create RSS 2.0 feeds.
Example:
require(ContentFeeder.class.php);
$rss =& new ContentFeeder_RSS2;
Enhancements:
- change default character set to UTF-8
- change default escapement to none
- add escape type of none
- add setDefaultEscapeType()
Download (0.008MB)
Added: 2005-08-29 License: GPL (GNU General Public License) Price:
1518 downloads
WaveMixer 0.4
WaveMixer is a multitrack sample editor. more>>
WaveMixer is a multitrack sample editor.
WaveMixer is a multitrack wave editor. It can mix mutliple sound together to make some music.
We want to do an audio software that is simple to use for anyone, and not only by profesionnal users.
Main features:
- Can load many sound format like: wave file, mp3, ogg.
- Show up the file in the sound editor
- You can apply some cool effect on a sample like: fade-in/out, echo, high and low pass filter, ...
- Can save a modified sample to mp3, ogg or wave format
- Can edit Metadata (id3 tag) thanks to TagLib...
- Handles very large file !
- Use esound to write the sound to the sound card
- Zoom in and out on a sample
- Wavemixer got a powerfull file explorer! All is done with dragn drop.
- You can drop files from konqueror or nautilus.
- You can put many samples on the track editor to assemble them and create some very cool music !
- Unimited tracks!
- On each track, you can play with volume and pan
- When playing, a very great Vumeter is drawn to show up the peak volume of the sound/music! Thats cool !
- Wavemixer can save an entire project in xml file for further load...
<<lessWaveMixer is a multitrack wave editor. It can mix mutliple sound together to make some music.
We want to do an audio software that is simple to use for anyone, and not only by profesionnal users.
Main features:
- Can load many sound format like: wave file, mp3, ogg.
- Show up the file in the sound editor
- You can apply some cool effect on a sample like: fade-in/out, echo, high and low pass filter, ...
- Can save a modified sample to mp3, ogg or wave format
- Can edit Metadata (id3 tag) thanks to TagLib...
- Handles very large file !
- Use esound to write the sound to the sound card
- Zoom in and out on a sample
- Wavemixer got a powerfull file explorer! All is done with dragn drop.
- You can drop files from konqueror or nautilus.
- You can put many samples on the track editor to assemble them and create some very cool music !
- Unimited tracks!
- On each track, you can play with volume and pan
- When playing, a very great Vumeter is drawn to show up the peak volume of the sound/music! Thats cool !
- Wavemixer can save an entire project in xml file for further load...
Download (0.86MB)
Added: 2005-11-07 License: GPL (GNU General Public License) Price:
1448 downloads
Transcend 0.3
Transcend can best be described as retro-style, abstract, 2D shooter. more>>
Transcend can best be described as retro-style, abstract, 2D shooter. The graphics are geometrical, and the pace is sometimes frenzied.
Two features set Transcend apart from other games. First, its dynamic graphical engine, which can smoothly morph from one complex shape to another, produces striking displays.
Combining these dynamic shapes with subtle randomizations makes each play through a Transcend level visually different from the last. The second novel feature is Transcends musical power-up system.
As you play through a level, you are simultaneously assembling an abstract visual collage and arranging a unique piece of music. Transcend merges video games with pure art---it can be viewed either as a game or as a multimedia sculpture.
Though I first read it after developing Transcend, the Scratchware Manifesto captures the spirit that motivated me to develop a game.
<<lessTwo features set Transcend apart from other games. First, its dynamic graphical engine, which can smoothly morph from one complex shape to another, produces striking displays.
Combining these dynamic shapes with subtle randomizations makes each play through a Transcend level visually different from the last. The second novel feature is Transcends musical power-up system.
As you play through a level, you are simultaneously assembling an abstract visual collage and arranging a unique piece of music. Transcend merges video games with pure art---it can be viewed either as a game or as a multimedia sculpture.
Though I first read it after developing Transcend, the Scratchware Manifesto captures the spirit that motivated me to develop a game.
Download (1.8MB)
Added: 2005-09-01 License: GPL (GNU General Public License) Price:
1584 downloads
Z80-ASM
Z80-ASM is a Z80 assembler and debugger. more>>
Z80-ASM is a compiler/assembler and monitor(including disassembler) for the Z80 CPU. It runs under Linux (probably also under other UNIX-flavours) and DO$ (DJGPP version 2.03 checked). Its written in C and source-code availible!
Each Z80-ASM package contains a compiler for the Z80 assembling language and a monitor including an interactive debugger. Compiler is a two-pass one, which knows all documented Z80 instructions. It has labels, comments and since 2.1 can even evaluate constant arithmetic expressions.
Debugger is interactive, it shows content of all registers, memory, stack, program. You can trace program, trace it step by step, modify program, registers and content of memory, load and save parts of memory.
Installation:
Everything you need to run the Z80-ASM is Linux or DO$ system (it should also work on other Unixes) and GCC/DJGPP compiler.
To install the Z80-ASM you must do following:
- download and unpack the archive
- cd to the just created z80-asm directory
- read the INSTALL file
- according to instructions youve read install the Z80-ASM :) but typically a make will do what you want.
<<lessEach Z80-ASM package contains a compiler for the Z80 assembling language and a monitor including an interactive debugger. Compiler is a two-pass one, which knows all documented Z80 instructions. It has labels, comments and since 2.1 can even evaluate constant arithmetic expressions.
Debugger is interactive, it shows content of all registers, memory, stack, program. You can trace program, trace it step by step, modify program, registers and content of memory, load and save parts of memory.
Installation:
Everything you need to run the Z80-ASM is Linux or DO$ system (it should also work on other Unixes) and GCC/DJGPP compiler.
To install the Z80-ASM you must do following:
- download and unpack the archive
- cd to the just created z80-asm directory
- read the INSTALL file
- according to instructions youve read install the Z80-ASM :) but typically a make will do what you want.
Download (0.47MB)
Added: 2005-04-22 License: GPL (GNU General Public License) Price:
1664 downloads
DNA BASER 2.60
Visit us for updated info: http://www.DNABaser.com DNA Baser Assembler is easy to use software for simple and batch DNA sequence assembly, DNA sequence analysis, contig editing, metadata integration and mutation detection. It also offers a powerful chromatogram viewer/editor. The truly user-friendly interface makes DNA Baser the best choice for DNA contig assembly. For more details, see the DNA BASER Features page. File formats supported are abi, scf and seq (or FASTA). Features: end clip, export,auto trim... more>>
DNA BASER - Visit us for updated info: http://www.DNABaser.com
DNA Baser Assembler is easy to use software for simple and batch DNA sequence assembly, DNA sequence analysis, contig editing, metadata integration and mutation detection. It also offers a powerful chromatogram viewer/editor. The truly user-friendly interface makes DNA Baser the best choice for DNA contig assembly. For more details, see the DNA BASER Features page.
Why is DNA Baser Assembler special?
Any software company pretends that their product is the best. But lets see for real if DNA Baser can offer you a better proposition. As you will see below we concentrate on adding automatic and batch functions to our product in order to decrease the time. Additional to this, DNA Baser is available at a "kill your competition" price.
Forget about manually trimming the low quality ends of your sequences. DNA Baser Assembler will do it for you!
Do you think you need weeks to assemble hundreds of contigs? What about doing this in minutes? DNA Baser is the only software that can automatically detect and assemble sequences belonging to the same contig based on their filename.
Do you think that is necessary to spend more than 20 minutes to correct discrepancies and mismatches in every contig? Wrong! DNA Baser is the first software which can make correct suggestions in at least 98% of cases.
Have you ever wondered how others laboratories afford to have sequence assembly software in EVERY computer? Simple! They dont spend thousands of dollars for each license. They use DNA Baser Assembler. DNA Baser is affordable, has no annual maintenance fees, technical support is included in price and you have instant access to your key, right after purchase.
You dont have to fill in and submit forms in order to get a trial version. If you want to try it, you can download and install it in less than one minute. No personal data or registration process is required. The trial version is fully functional.
DNA BASER Assembler offers a smart navigation system that takes you to the location of each sequence ambiguity / mutation with a single click.
Enhancements:
Version 2.60
New: Metadata and batch metadata integration.
New: Button to open Windows Explorer in contigs folder, after sequence assembly.
New: Remove vectors from single chromatograms.
New: SEQUENCE ANALISYS - mark al bases with a confidence level (QV) below a specified threshold, in red.
New: Batch convert from chromatogram to Fasta with vector removal and automatic metadata integration.
New: Resizable chromatograms.
Full support for low quality sample ends editing.
100% compatible with Mac via Parallels/Bootcamp/VMWare.
Improved handling of corrupted/invalid ABI/SCF files.
Improved contig editor.
Improved file association.
Improved Assemble to reference.
Improved log window.
Improved file handling: Before starting the contig, check if all files in the JobList are valid. Invalid samples are automatically removed from Job List so the assembly process can continue without human intervention. Build a list of invalid files and report it.
Improved user interface: new toolbar, improved embedded help, interactive help, workflow...
Improved sample viewer: Mark as trusted/un-trusted can now be used also in Sample viewer window
New: Show error message while trying to open empty/invalid FASTA files
Improved: Correctly handle multiple contigs resulted when assembling to a reference.
Improved: menu Save as Fasta/Seq/Scf was replaced with Save all as... and Save selected as.... Now the user can choose where to save the file.
Version 2.10
Batch assembly. Thousand of contigs can be assembled at once.
System Requirements:CPU: 333MHz, 64MB RAM, Video 1024x768, 2MB HDD free space<<less
Download (1.3Mb)
Added: 2008-01-08 License: Free Price: Free
101 downloads
Class::MakeMethods::Template 1.01
Class::MakeMethods::Template package contains extensible code templates. more>>
Class::MakeMethods::Template package contains extensible code templates.
SYNOPSIS
package MyObject;
use Class::MakeMethods::Template::Hash (
new => new,
string => foo,
number => bar,
);
my $obj = MyObject->new( foo => "Foozle", bar => 23 );
print $obj->foo();
$obj->bar(42);
MOTIVATION
If you compare the source code of some of the closure-generating methods provided by other subclasses of Class::MakeMethods, such as the hash accessors provided by the various Standard::* subclasses, you will notice a fair amount of duplication. This module provides a way of assembling common pieces of code to facilitate support the maintenance of much larger libraries of generated methods.
This module extends the Class::MakeMethods framework by providing an abstract superclass for extensible code-templating method generators.
Common types of methods are generalized into template definitions. For example, Template::Generics new provides a template for methods that create object instances, while Template::Generics scalar is a template for methods that allow you to get and set individual scalar values.
Thse definitions are then re-used and modified by various template subclasses. For example, the Template::Hash subclass supports blessed-hash objects, while the Template::Global subclass supports shared data; each of them includes an appropriate version of the scalar accessor template for those object types.
Each template defines one or more behaviors, individual methods which can be installed in a calling package, and interfaces, which select from those behaviours and indicate the names to install the methods under.
Each individual meta-method defined by a calling package requires a method name, and may optionally include other key-value parameters, which can control the operation of some meta-methods.
<<lessSYNOPSIS
package MyObject;
use Class::MakeMethods::Template::Hash (
new => new,
string => foo,
number => bar,
);
my $obj = MyObject->new( foo => "Foozle", bar => 23 );
print $obj->foo();
$obj->bar(42);
MOTIVATION
If you compare the source code of some of the closure-generating methods provided by other subclasses of Class::MakeMethods, such as the hash accessors provided by the various Standard::* subclasses, you will notice a fair amount of duplication. This module provides a way of assembling common pieces of code to facilitate support the maintenance of much larger libraries of generated methods.
This module extends the Class::MakeMethods framework by providing an abstract superclass for extensible code-templating method generators.
Common types of methods are generalized into template definitions. For example, Template::Generics new provides a template for methods that create object instances, while Template::Generics scalar is a template for methods that allow you to get and set individual scalar values.
Thse definitions are then re-used and modified by various template subclasses. For example, the Template::Hash subclass supports blessed-hash objects, while the Template::Global subclass supports shared data; each of them includes an appropriate version of the scalar accessor template for those object types.
Each template defines one or more behaviors, individual methods which can be installed in a calling package, and interfaces, which select from those behaviours and indicate the names to install the methods under.
Each individual meta-method defined by a calling package requires a method name, and may optionally include other key-value parameters, which can control the operation of some meta-methods.
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Added: 2007-06-18 License: Perl Artistic License Price:
859 downloads
LMarbles 1.0.7
LMarbles is an Atomix clone with a slight change in concept. more>>
LMarbles is an Atomix clone with a slight change in concept. Instead of assembling molecules you create figures out of marbles. Nevertheless, the basic game play is the same: If a marble starts to move it will not stop until it hits a wall or another marble.
To make it more interesting there are obstacles like one-way streets, crumbling walls and portals.
As Marbles is meant as a puzzle game you play against a move limit and not a time limit. This way you have as much time as you need to think.
<<lessTo make it more interesting there are obstacles like one-way streets, crumbling walls and portals.
As Marbles is meant as a puzzle game you play against a move limit and not a time limit. This way you have as much time as you need to think.
Download (0.80MB)
Added: 2005-04-02 License: GPL (GNU General Public License) Price:
1673 downloads
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