libGenome 1.0.0
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libGenome 1.0.0 Ranking & Summary
File size:
0.44 MB
Platform:
Any Platform
License:
GPL (GNU General Public License)
Price:
Downloads:
1322
Date added:
2006-03-22
Publisher:
Aaron Darling
libGenome 1.0.0 description
libGenome is a freely available toolkit for developing bioinformatic related software in C++.
libGenome library is intended to take the hassle out of performing common tasks on genetic sequence and annotation data.
libGenome is a development library written in ANSI C++.
It is known to compile on the following platforms:
- Linux using the gcc compiler
- Solaris using the gcc compiler
- Windows using Metrowerks CodeWarrior
- MacOS 9 using Metrowerks CodeWarrior
- OpenBSD using the gcc compiler
- Cygwin using the gcc compiler
libGenome can access sequence data in several different file formats:
- Reads and writes Multi-FastA files, designated by a .fas file extension
- Reads and writes GenBank flat file database entries
- Reads DNAStar .SEQ file format
- Reads and writes raw sequence data
- Reads ABI file format
libGenome can manipulate sequence data in the following ways:
- Append
- Truncate
- Erase subsequences
- Insert subsequences
- Reverse
- Complement
- Ambiguity sensitive and insensitive comparison
- Translate DNA to RNA, DNA to Protein, RNA to DNA, RNA to Protein, and vice versa.
libGenome has a well developed system for accessing annotation data in GenBank records.
libGenome library is intended to take the hassle out of performing common tasks on genetic sequence and annotation data.
libGenome is a development library written in ANSI C++.
It is known to compile on the following platforms:
- Linux using the gcc compiler
- Solaris using the gcc compiler
- Windows using Metrowerks CodeWarrior
- MacOS 9 using Metrowerks CodeWarrior
- OpenBSD using the gcc compiler
- Cygwin using the gcc compiler
libGenome can access sequence data in several different file formats:
- Reads and writes Multi-FastA files, designated by a .fas file extension
- Reads and writes GenBank flat file database entries
- Reads DNAStar .SEQ file format
- Reads and writes raw sequence data
- Reads ABI file format
libGenome can manipulate sequence data in the following ways:
- Append
- Truncate
- Erase subsequences
- Insert subsequences
- Reverse
- Complement
- Ambiguity sensitive and insensitive comparison
- Translate DNA to RNA, DNA to Protein, RNA to DNA, RNA to Protein, and vice versa.
libGenome has a well developed system for accessing annotation data in GenBank records.
libGenome 1.0.0 Screenshot
libGenome 1.0.0 Keywords
RNA
DNA
reads and writes
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libGenome 1.0.0 Copyright
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