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Bio::Ontology::GOterm 1.4

Bio::Ontology::GOterm 1.4

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Bio::Ontology::GOterm 1.4 Ranking & Summary

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User Review: 0 (0 times)
File size: 4.7 MB
Platform: Any Platform
License: Perl Artistic License
Price:
Downloads: 1112
Date added: 2006-10-10
Publisher: Christian M. Zmasek

Bio::Ontology::GOterm 1.4 description

Bio::Ontology::GOterm is a representation of GO terms.

SYNOPSIS

$term = Bio::Ontology::GOterm->new
( -go_id => "GO:0016847",
-name => "1-aminocyclopropane-1-carboxylate synthase",
-definition => "Catalysis of ...",
-is_obsolete => 0,
-comment => "" );

$term->add_definition_references( @refs );
$term->add_secondary_GO_ids( @ids );
$term->add_aliases( @aliases );

foreach my $dr ( $term->each_definition_reference() ) {
print $dr, "n";
}

# etc.

This is "dumb" class for GO terms (it provides no functionality related to graphs). Implements Bio::Ontology::TermI.

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