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Bio::Map::CytoMap 1.4

Bio::Map::CytoMap 1.4

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Bio::Map::CytoMap 1.4 Ranking & Summary

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User Review: 0 (0 times)
File size: 4.7 MB
Platform: Any Platform
License: Perl Artistic License
Price:
Downloads: 1095
Date added: 2006-11-03
Publisher: Heikki Lehvaslaiho

Bio::Map::CytoMap 1.4 description

Bio::Map::CytoMap is a Bio::MapI compliant map implementation handling cytogenic bands.

SYNOPSIS

use Bio::Map::CytoMap;
my $map = new Bio::Map::CytoMap(-name => human1,
-species => $human);
foreach my $marker ( @markers ) { # get a list of markers somewhere
$map->add_element($marker);
}

This is the simple implementation of cytogenetic maps based on Bio::Map::MapI. It handles the essential storage of name, species, type, and units as well as in memory representation of the elements of a map.

For CytoMaps type is hard coded to be cytogeneticmap and units are set to but can be set to something else.

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